Raoultella sp. X13: DSD31_02515
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Entry
DSD31_02515 CDS
T05540
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
rao
Raoultella sp. X13
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rao03019
]
DSD31_02515
Messenger RNA biogenesis [BR:
rao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DSD31_02515
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
AXC28408
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All DBs
Position
508844..510784
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AA seq
646 aa
AA seq
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MRLTTKFSAFVTLLTSLTIFVTLIGASLSFYNGIQLKMENRVQAVATMLDNRLISSSFDK
LEPQMDELMTPVEIVQVDFLLNGKPVYGHSRSDSYRPPGSKNQYREITVPSLKHPGMTIH
VVYLDPMVNYFRSLHITGPLSIAIGLMVLVIFFSVRWIRRQLAGQELLEVRAARILSGER
GPQVRGSVHEWPASTSSALDMLLSELQFASDQRSRMDTLIRSYAAQDSKTGLNNRLFFDN
QLATLLEDQEKVGSHGIVMMIRLPEFDLLRDNWGRAAAEEHYFTLINLLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKEADSIAGLLLKAVDALPPTRILDRDDMMHIGLCAFRSGQTT
AQVMERAEAATRNAVLQGSNSWAVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TRDGRVHHRELMSRLYDGKEEVIAAEYMPMVQQFGLAEEYDRLQITRLLPFLSFWPEENL
ALQVTVESLIRPRFQRWLRDTLMQSEKSQRRRIIFELAEADVCQYIGRLQPVMRLVNALG
IRVAVVQAGLTLVGTSWIKQLDVEVIKLHQGLSRNIEKRSENQLLVQSLVEACKGMPVQV
FATGVRSRSEWQVLSQCGVTGGQGEFFAASQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcagcatttgtcacgctgcttaccagcctgaccatcttt
gtcacgctcatcggtgcttcgctgagtttttataacggtatccagctgaagatggagaat
cgcgtccaggccgtggcgacgatgctggataaccgcctgatctcatcctcgttcgataag
ctcgaaccgcaaatggatgagctgatgacgccggtggagattgtgcaggtcgattttctg
cttaacggcaagccggtgtacggtcactcgcgtagcgacagctatcgtccgccggggagt
aagaatcagtatcgtgaaataacggtaccgtcgttaaaacatcccggtatgacgattcac
gtggtctacctcgacccgatggtgaattatttccgctcgctgcacatcaccgggccctta
tcgatagctatcggtctgatggttctggttatctttttctccgtacgctggattcgccgt
cagcttgcaggccaggagctgctggaggtgcgcgctgcgcgaatcctcagtggcgaacgc
gggccgcaggttcgagggtcggtacatgagtggccggccagcaccagcagcgcgctggat
atgctgctttccgaactgcagtttgccagcgatcagcgtagtcgtatggatacgctgatt
cgttcttatgctgcacaagactcgaaaaccgggctgaataatcgtctgttctttgataat
cagctggcaactctgctggaagatcaggaaaaagtgggttcgcacggtatcgtgatgatg
attcgcctgccggagttcgatctgctacgtgataactggggacgagccgctgccgaagaa
cactacttcacgctcatcaacctgctgtcgacttttattatgcgctatcccggggcgctg
ctggcgcgctaccaccgcagtgattttgccgtactccttcctcaccgtaccttaaaagag
gccgatagcatcgccgggttgctgttaaaagcggtggatgcgctgccgccgacgcggatt
cttgaccgcgatgacatgatgcacatcggtctttgcgctttccgcagcgggcagacaacg
gcccaggtgatggaacgcgccgaggctgcgacgcgcaatgcggtgctacagggcagcaat
agctgggccgtctacgatgactcgttaccggagaaaggacgcggtaacgtccgctggcgt
acgctgattgaacaaatgctcagccgcggcgggccgcgactgtaccagaagccggccgtt
acccgcgatggacgcgtccatcatcgtgaactgatgtcgcggttgtatgacggaaaggaa
gaggtgatcgcggcagaatatatgccaatggtgcaacaatttggtctggcggaagagtac
gaccgcctgcagatcacgcggttactgccatttttaagtttttggccggaggaaaacctc
gcgctgcaggtgacggtggagtcattgatccggccgagatttcagcgctggctgcgtgat
accttgatgcagagtgaaaaatcgcaacgtcgacggattatttttgaacttgcagaggca
gatgtttgtcaatatatcggccgcttacaaccggtaatgcgcctggtcaatgctctgggt
attcgtgtcgccgtcgtgcaggccggattaacgctggttggaaccagttggatcaagcag
ttggatgtcgaagtgattaagctgcaccaggggctgtcgcgcaatatcgaaaagcgcagt
gagaaccagctgctggttcagagcctggtggaggcctgtaagggcatgccggtccaggtt
tttgcaaccggcgttcgcagtcgcagtgagtggcaggtgctgtctcagtgcggtgtcacg
ggtggtcagggggaattttttgccgcctcacagccacttgacacaaatgtgaaaaaatat
tcgcaaagatactcggtttga
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