Raoultella sp. X13: DSD31_02960
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Entry
DSD31_02960 CDS
T05540
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rao
Raoultella sp. X13
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rao03016
]
DSD31_02960
Enzymes [BR:
rao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DSD31_02960
Transfer RNA biogenesis [BR:
rao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DSD31_02960
Prokaryotic type
DSD31_02960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AXC28490
LinkDB
All DBs
Position
595901..596845
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGLVVEERPLTFSDEQLAAALDSFRGETQ
QVPSMYSALKYQGKKLYEYARQGIDVPREARPINVYELLFIRHEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEQLQALVEQAMAQDIPAAQLLDPL
LMPMDSPASDYPLVNIPETSAVYFKNGNPVRTAGAPLQGLVRVTEGEEGKFLGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgatgtgcatggcgtgctgttgctggataaacct
cagggcgcgtccagcaacgatgtactgcagaaagtcaaacgtatctataacgcgaatcgc
gcagggcacaccggtgcgctggatccgctggcaaccggcatgctgccgatttgtctcggg
gaagccacgaagttttcccagtatctgctggattccgataagcgctatcgtgtgattgcg
aagctcggacagcgtaccgacacctctgatgccgatggcctggtggtggaagagcgcccg
ctgaccttcagcgacgaacagctggcggcggcgctggacagtttccgcggcgaaacccaa
caggtaccgtcgatgtattcggcgctgaaataccaggggaaaaagctctacgaatatgcc
cgtcaggggattgacgtcccgcgtgaagcccggccgattaacgtctatgagctgctgttt
atccgccacgaaggggatgagctggagctggaaattcactgctccaaaggcacctatatc
cggacgattattgacgatctgggtgagaaactgggctgtggcgcacacgttatttatctg
cgtcgtctggccgtcagcaaatatccggttgagcggatggtgacgctggagcagctgcag
gcgctggttgaacaggccatggcgcaggatattcctgccgcgcagctgctcgatccgctg
ctgatgccgatggacagcccggcgtcggactatcctctggttaatattcccgaaacatcg
gctgtttactttaagaatggcaacccggtccgtactgcaggcgccccgttacagggcctg
gtgcgggtcactgaaggtgaagagggtaagtttctcggtatgggtgagattgacgatgaa
ggccgcgtggcgccgcgtcgtctggttgtcgaatacccagcttga
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