Raoultella sp. X13: DSD31_03390
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Entry
DSD31_03390 CDS
T05540
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
rao
Raoultella sp. X13
Pathway
rao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSD31_03390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rao03400
]
DSD31_03390
Enzymes [BR:
rao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
DSD31_03390
DNA repair and recombination proteins [BR:
rao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSD31_03390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AXC28573
LinkDB
All DBs
Position
687222..687728
Genome browser
AA seq
168 aa
AA seq
DB search
MINDILAPDLRVVFCGINPGKSSAHTGFHFAHPGNRFWKVIYQAGFTDRLLKPEEELQLL
DTRCGITMLVERPTVQASEVALQELRSGGRELVLKIEQYQPRALAILGKQAFEKAFQVRG
ARWGKQQVTIGDTEVWVLPNPSGLNRATLDKLVEAYRELDDALASRGR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgattaacgatattctggcgccggacctgcgggtggtcttctgcggcatcaatccgggg
aagtcctctgcccatactggttttcatttcgcgcatccgggtaatcgcttctggaaggtg
atttaccaggccggttttaccgaccgtctgctgaagcctgaagaggagctgcagctgctc
gatacgcgctgcgggatcactatgctggtggaacgcccgacggttcaggccagcgaagtc
gccctgcaggagctacgcagcggcggccgggagctggtgctgaaaattgaacagtatcag
ccgcgggcgctggcgattctcggtaaacaggcctttgagaaagcgtttcaggtacgcggt
gcgcgttggggcaagcagcaggtgaccatcggcgatacggaagtgtgggtgctgcccaac
cccagcggactgaaccgggcgacgctggataagctagtggaggcgtatcgtgaactggat
gatgcgctggcatcgcgaggtcgatag
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