Raoultella sp. X13: DSD31_03965
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Entry
DSD31_03965 CDS
T05540
Name
(GenBank) adenine DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
rao
Raoultella sp. X13
Pathway
rao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSD31_03965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rao03400
]
DSD31_03965
Enzymes [BR:
rao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
DSD31_03965
DNA repair and recombination proteins [BR:
rao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSD31_03965
Prokaryotic type
DSD31_03965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
HHH_8
HHH_5
NUDIX
YqhI
DUF6308
Motif
Other DBs
NCBI-ProteinID:
AXC28679
LinkDB
All DBs
Position
complement(806390..807448)
Genome browser
AA seq
352 aa
AA seq
DB search
MTFLAAQFSAQVLDWYDKYGRKTLPWQMGKTPYKVWLSEVMLQQTQVATVIPYFERFMAR
FPTVIDLAEAPLDEVLHLWTGLGYYARARNLHKAAQQVASLHRGEFPQTFDEVAALPGVG
RSTAGAILSLSLGKHYPILDGNVKRVLARCYAVNGWPGKKEVEKRLWQISEEVTPAKGVE
RFNQAMMDLGAIVCTRTKPKCEICPLSNGCIAYANHSWAQYPGKKPKQTIPERTGYFLLM
QHGNEVLLSQRPPVGLWGGLFCFPQFEEEAALREWLAERGIKDDNLTQLTAFRHTFSHFH
LDIVPMWLSIDSSGACMDEGSTLWYNLAQPPSVGLAAPVERLLQQLKAGALA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ttgacttttctcgccgcgcaattttcagcccaggtgctggactggtacgacaaatacggg
cgtaaaaccctgccatggcaaatgggtaaaacgccttacaaagtatggctctccgaggtg
atgttgcaacaaacgcaggtcgccacggttattccctattttgaacgctttatggcgcgc
ttcccgacggttatcgatctggccgaggcgccgctggatgaagtgctgcatctgtggacc
ggcctgggctattacgcccgcgcgcgtaatttacataaggcggcgcagcaggtggcgagc
ctgcaccgcggcgaattcccgcaaacctttgacgaagtggcggcgctacccggcgtcgga
cgctccacggccggcgcgattttatccctctcccttggcaagcattaccccattctcgat
ggcaacgtgaagcgcgtgctggcccgctgctatgcggtcaacggctggccggggaaaaaa
gaggttgagaaacgattatggcagatcagcgaagaggtcaccccggcaaaaggggtcgag
cgctttaaccaggcgatgatggatctcggggcgatagtctgcacccgtacaaaacccaaa
tgcgagatctgtccgttaagtaacggctgcatcgcttacgcaaaccattcatgggcacaa
tatcctggcaaaaaaccgaagcagaccattccggagcggacgggctatttcctgctgatg
cagcacggcaacgaggtgttactttcccagcgtccgccggtcggcttatggggcggatta
ttctgttttccgcagtttgaagaggaggccgcgctccgcgaatggctggctgagcgtggg
ataaaggatgataatctgacgcagctgaccgcgttccgccacactttcagccatttccat
ctggatattgtgccgatgtggcttagcatagattcatctggcgcatgcatggatgaaggc
agcacactctggtataacttagcgcagccgccgtcggttggactggcggctcccgtggag
cgcttgttgcaacagttgaaggccggggctcttgcatag
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