Raoultella sp. X13: DSD31_04085
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Entry
DSD31_04085 CDS
T05540
Name
(GenBank) biosynthetic arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
rao
Raoultella sp. X13
Pathway
rao00330
Arginine and proline metabolism
rao01100
Metabolic pathways
rao01110
Biosynthesis of secondary metabolites
Module
rao_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
DSD31_04085
Enzymes [BR:
rao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
DSD31_04085
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
AXC28702
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Position
826852..828828
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AA seq
658 aa
AA seq
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MSDDISSVSPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWWGNNYYDVNELGHISVC
PDPDVPEARVDLAELVKAREAQGQRLPALFCFPQILQHRLRSINAAFKRARESYGYNGDY
FLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYI
RLALVGEKMGHKVYLVIEKMSEIAIVLEEAERLNVVPRLGVRARLASQGSGKWQSSGGEK
SKFGLAATQVLQLVEILRAAGHLESLQLLHFHLGSQMANIRDIATGVRESSRFYVELHKL
GVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNEYANNIIWAIGDACEENGLPHPTVITE
SGRAVTAHHTVLVSNIIGVERNEYTEATPPAQDAARPLQSMWETWQEMHETGNRRSLREW
LHDSQMDLHDIHIGYSSGTFNLQERAWAEQLYLNMCHEVQKQLDPSNRAHRPIIDELQER
MADKIYVNFSLFQSMPDAWGIDQLFPVMPLEGLNMVPERRAVLLDITCDSDGAIDHYVDG
DGIATTMPMPEYDPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELS
DEGDTVADMLQYVQLDPNTLLTQFRDQVKNSGLDEALQQQFLEEFEAGLYGYTYLEDE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacatttcttcagtttcgccttcgtcagcaggcgaacacggcgtactacgt
tccatgcaggaggttgcgatgagctcccaggaagccagcaaaatgctacgtacttacaat
attgcctggtggggtaataactactacgacgttaacgaactgggccatatcagcgtttgc
ccggatcctgacgtcccggaagcgcgcgttgaccttgcagaattagtgaaagcacgcgaa
gcgcaggggcagcgcctgccggcactgttctgcttcccgcagatcctgcaacaccgactg
cgttcgattaacgccgcgtttaaacgcgcgcgtgagtcctacggctataacggcgactac
ttcctggtttacccgatcaaggttaaccagcatcgccgcgtgattgagtcgttgatccat
tccggtgaaccgctgggtctggaagctggctccaaggcggagctgatggcggtactggcg
cacgccggtatgacccgcagcgtgatcgtctgtaacggctacaaagaccgcgagtatatc
cgtctggcgctggtcggcgaaaagatgggccacaaggtctatctggtcatcgaaaagatg
tcggaaatcgccatcgtgctggaagaagccgagcgcctgaatgtcgttccgcgccttggc
gtgcgtgcgcgtctggcctcgcagggctccggtaaatggcagtcctccggcggtgaaaaa
tcgaagttcggcctggcggcaacacaggttctgcagctggttgagattctgcgcgcggca
gggcatctggaaagcctgcagctgctgcacttccacctcggctcgcagatggccaacatt
cgcgatatcgccaccggcgtgcgtgaatcgtcacgcttctatgttgagctgcataagctc
ggcgttaatattcagtgcttcgatgttggcggcggtctgggcgtggactatgaaggtacc
cgttcacagtccgactgttcggtgaactacggcctgaatgagtacgccaacaacattatc
tgggcgattggcgatgcctgtgaagagaacggcctgccgcacccgacggtgattaccgaa
tccgggcgcgcggttaccgcacaccacaccgtgctggtctccaacatcatcggcgttgag
cgcaacgaatacaccgaagcgaccccgcctgcgcaagacgcagcgcgtccgctgcagagc
atgtgggaaacctggcaggagatgcacgagaccggtaatcgccgctcgctgcgcgaatgg
ctgcacgacagccagatggatctccacgatattcatatcggctactcgtccggtaccttc
aatcttcaggagcgcgcctgggcagaacagctgtatctgaacatgtgccatgaagtccag
aagcagctcgacccgagcaaccgcgcgcatcgtccgattatcgacgaactgcaggagcgg
atggcggataagatttacgtcaacttctcgctgttccagtcgatgccggacgcgtggggt
atcgatcagctgttcccggtgatgccgctggaagggctgaacatggtacctgaacgccgc
gcggtgctgctggatattacctgcgactccgatggcgcgattgaccactacgtggatggc
gacgggattgccaccaccatgccgatgccggaatacgatcctgaaaacccgccgatgctg
ggcttctttatggttggcgcctatcaggagatcctcgggaacatgcacaacctgttcggc
gatactgaagcggtggacgtcttcgtcttccctgacggcagcgttgaggttgagctctcc
gacgaaggggataccgtggcggatatgctgcaatatgtgcagctcgatccgaacacgctg
ctgacccagttccgcgatcaggtgaaaaactccggcctcgacgaagcgctgcagcagcag
ttcctcgaagagttcgaagcggggctgtacggatacacttatctggaagacgagtaa
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