Raoultella sp. X13: DSD31_04740
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Entry
DSD31_04740 CDS
T05540
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
rao
Raoultella sp. X13
Pathway
rao00040
Pentose and glucuronate interconversions
rao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DSD31_04740
Enzymes [BR:
rao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
DSD31_04740
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
AXC28825
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All DBs
Position
complement(956376..957503)
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AA seq
375 aa
AA seq
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MKGKIIPLNFRTTEDSVTGRQVIRMTPPHVICHRNYFYQKCFTRDGSKLIFGGGFEGHWN
YYLLDLATQQAIQLTDGPGDNTFGGFLSDDDRTLWYVKNNRQLRRVDLATREEQVVYTVD
DDWVAYGTWVANSDCSKLVGIEIKKSDWRPLTDWSKFRAFYFTQPECRLINIDLHSGERR
VVLQEKRWLGHPIYRPFDDQTIAFCHEGPRDAIDARMWLINADGSNMRNVRQHQPGESFT
HEFWVPDGSALYYVAHRENDPHRYLYRADPTTLDNRQLLTIPPCSHLMSNYDGSLVVGDG
APHHTGDIQLNDPFIWVFDVQSGTQRAICRHDSSWKVLDGDRQVTHPHPSFSPDDRWVLF
TSDKEGMPALYLAEV
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaaaatcatcccgctgaatttccgtaccacggaagacagcgtaaccggccgc
caggtgatccggatgacgcccccgcacgttatctgccaccgtaactacttctatcaaaag
tgctttacccgggatggcagcaaacttattttcggcggcggattcgagggccactggaac
tactatttactcgatctggccacgcagcaggccatacagctgaccgacgggccgggcgat
aataccttcggcggttttctatccgacgacgaccgcacgctgtggtatgtgaaaaacaat
cggcagctgcgccgcgtggatctggcgacgcgggaagagcaggtggtttacacagtggat
gacgactgggtcgcctatggtacctgggtggcaaacagcgattgcagcaaactggtcggc
atcgagataaaaaaaagcgactggcggccgctgaccgactggagtaaattccgcgccttt
tattttacccaacccgaatgccgcctgatcaatatcgacctgcatagcggcgagcgccgc
gttgtcctgcaggagaaacgctggctgggccatccgatttaccggccgtttgatgaccag
accatcgcgttctgccacgaaggaccgcgtgatgctatcgacgccaggatgtggcttatc
aacgctgacggcagcaatatgcgcaacgttcgccagcaccagccgggagagagtttcacc
catgagttctgggtgccggatggctctgcgctctattacgtcgcccaccgggaaaacgat
ccgcatcgctatctctaccgtgccgaccccaccaccctggataatcgtcagctgctgacc
attcctccctgctcgcacctgatgagtaactacgatggttcgctggtcgtcggcgatggc
gcgccgcatcataccggcgatattcagctgaacgatccgtttatctgggtatttgacgtg
cagtccggtacgcagcgggccatttgtcgccacgactccagctggaaagtgctcgacggc
gatcgtcaggtcacccacccccatccgtcattttcgccggatgaccgctgggtgctgttt
acctccgataaagaagggatgccggcgctgtacctggcggaggtgtag
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