Raoultella sp. X13: DSD31_04780
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Entry
DSD31_04780 CDS
T05540
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rao
Raoultella sp. X13
Pathway
rao00300
Lysine biosynthesis
rao00470
D-Amino acid metabolism
rao01100
Metabolic pathways
rao01110
Biosynthesis of secondary metabolites
rao01120
Microbial metabolism in diverse environments
rao01230
Biosynthesis of amino acids
Module
rao_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DSD31_04780
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSD31_04780
Enzymes [BR:
rao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DSD31_04780
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AXC28833
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Position
964493..965755
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AA seq
420 aa
AA seq
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MPRSLYATDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAQLSQFDVVRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALAAGYDPQQHPEDIVFTADLIDEATLERVKALQIPVN
AGSVDMLSQLGEVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYSHLPAALEVMRR
YQLQLVGIHMHIGSGVDYGHLEQVCGAMVRQVVEFGQDLQAISAGGGLSIPYHEGEEAID
TDHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAESGVLVSQVRSVKEMGSRHFVLIDA
GFNDLMRPSMYGSYHHITALAADGRNLSAAPLIDTVVAGPLCESGDVFTQQEGGKVETRL
LPEVAPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGSARLIRRRQTIQELLALELF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccacgctcgctttacgctaccgataccgacctgactgccgagaacctgctccgtctg
cctgccgagtttggctgcccggtgtgggtctatgacgcgcagattatccgccgccagata
gcccagctcagccagttcgacgtggtgcgttttgcccagaaggcctgctccaatatccat
attttgcgtctgatgcgtgagcagggcgttaaggtggactccgtctccctcggggagatt
gaacgtgcgctggcggcggggtatgacccgcagcagcacccggaagatatcgtttttacc
gccgacctgattgacgaggcgacgctggagcgcgtcaaggccctgcagattccggttaat
gccggttcagtcgatatgctgagccagctgggggaagtctctccaggccatcgcgtctgg
ctgcgcgtcaacccgggatttggtcacggccacagccaaaaaaccaacaccggcggcgaa
aacagcaaacacgggatctggtacagccatctgccggcggcgctggaagtgatgcgtcgc
tatcagctccagctggtggggatccacatgcatattggctccggggttgattatggccac
ctggaacaggtttgcggcgcgatggtgcgtcaggtggttgagtttgggcaggatctgcag
gcgatctccgccggcggcggactgtcgatcccttatcacgaaggtgaagaggcgatcgat
accgatcactactacggcttgtggaacgccgcgcgcgagcagatcgcccgacatctcggc
catccggtgaaactggaaatcgaaccgggtcgcttcctggtggccgaatccggggtgctg
gtctctcaggtacgtagcgtcaaagagatgggaagccgccactttgtcctgattgatgcc
ggttttaacgatctgatgcgtccgtcaatgtacggcagctatcaccatattaccgctctg
gcggcggatggccgcaacctgagcgccgcaccgcttatcgacaccgtcgtggccgggccg
ctgtgcgaatcgggcgacgtctttactcagcaggaagggggcaaggtggagacgcgtttg
ctgcctgaagtcgcgccgggagattatctggtgctgcatgatacgggggcttatggcgcg
tcaatgtcctcaaactacaatagccgtccgctgctgccggaagtgctgttcgacaacggc
agcgcacggctgatccgtcgtcggcagacgattcaggagctgctggccttagagctgttc
taa
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