Raoultella sp. X13: DSD31_04895
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Entry
DSD31_04895 CDS
T05540
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rao
Raoultella sp. X13
Pathway
rao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DSD31_04895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rao03400
]
DSD31_04895
Enzymes [BR:
rao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DSD31_04895
DNA repair and recombination proteins [BR:
rao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DSD31_04895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
Helicase_RecD
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
UvrD_C
AAA_28
MukB
PhoH
T2SSE
DEAD
AAA_33
DO-GTPase1
CbiA
TarH
TrwB_AAD_bind
AAA
Motif
Other DBs
NCBI-ProteinID:
AXC28854
LinkDB
All DBs
Position
993204..995042
Genome browser
AA seq
612 aa
AA seq
DB search
MTMDELLLEAASQRLLRPLDVQFALMVAQEAHPAVKLAAAVLSRDAGEGHVCLPIARLRT
DEFLSGKTNELREQLLAQAGVPDDWSALLLASEAVSGGERPTPIVLCGERLYLNRMWRNE
LTVARFFNEANQVVDVDEALLAQTLDALFPASDEIDWQKVAAAVALTRRISVISGGPGTG
KTTTVARLLAALIQTTRQPRCRIRLAAPTGKAAARLTESLGEALRRLPLTDEQKALLPTE
ASTLHRLLGAQPGSQRMRYHAGNPLHLDVLVVDEASMIDLPMMARLIDALPEHGRVIFLG
DRDQLASVEAGAVLGDICAWVNAGYTAGRAAQLERLTGHPVPAGESDVAGALRDSLCLLQ
KSYRFGSHSGIGSLARAVNNGDRHGVRATLRQAFEDIVLHPLSTTEEYEVMLKQSQEGYG
RYLQLLRERAEPEALIAAFGEFQLLCALRDGPYGVSGVNEQLEQMLNRRRAIALPRHSRW
YEGRPVMISRNDSALGLFNGDIGIALERGEGLRVWFPMPDGSIKSVQPSRLPEHDTAWAM
TVHKSQGSEFDHAALILPAKIVPLVTRELVYTAITRAKQRLSIYADEQVLTQSIVARTER
RSGLADIFASGV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggatgaactgctgctggaagctgccagtcagcgcctgctgcgcccgttagat
gtgcagtttgccctgatggtggcgcaagaggcgcatccggcggtgaagctggcggcggcg
gtgctcagccgtgatgccggcgaagggcacgtttgcctgccgatagcgcgtctgcggacg
gacgagtttctgagcggtaaaaccaacgaactgcgtgaacagctgctggcccaggcgggc
gtccccgatgactggtccgcgctgctgcttgcttcggaggcggtcagcggtggcgaacgt
ccaacgccgatcgtcctgtgcggcgagcgactctatctcaaccggatgtggcgtaatgag
ctgaccgtcgcccgcttcttcaacgaagctaaccaggttgtggacgttgacgaggccctg
ttggcccaaacgctggacgcgctgttccccgccagcgatgagatcgactggcaaaaagtt
gccgccgcagtggcgttgacccgccgtatttcggtgatttccggcggtcccggcaccgga
aaaaccaccaccgtcgccagactgctggcggcgttgattcagacaacccggcaaccgcgc
tgccgtatccgactggcggcgccgaccgggaaagcggcggcacgattgacggaatcgttg
ggggaggcgctgcgtcgcctgccgctaaccgatgagcagaaggcgctgttaccaaccgaa
gccagcacgttgcatcgtctgctgggcgctcagcccggtagccaacggatgcgctaccac
gccggtaatccgctgcacctcgatgtgctggtggtggatgaagcttcaatgattgacctg
ccgatgatggcgcggctgattgatgccctgccggagcacgggcgggttattttcctcggc
gaccgcgatcagctggcgtcggtggaggccggagcggtgctcggggatatttgtgcctgg
gtcaatgccggctataccgccggacgtgcggcgcagctggagaggctgaccggccacccg
gtgccggcgggagaaagtgatgtcgccggcgcgctgcgcgacagcctgtgcctgctgcaa
aaaagctatcgttttggcagtcattccggcatcggtagcctggctcgcgccgtgaacaac
ggcgatcgccacggcgtcagagcgacgttacgccaggccttcgaggatattgtgctgcat
ccgctgagtacgactgaagagtatgaagtcatgctaaagcagtcgcaggaaggatacggt
cgctatttgcagctgcttcgcgagcgggccgagccggaggcactgatcgccgcctttggt
gaatttcagctactgtgcgccctgcgcgacggcccttacggcgtcagcggggtgaatgaa
cagctggagcagatgcttaaccgtcggcgggcgatagcgctgccgaggcattcacgctgg
tatgaagggcgtccggtgatgatttcccgcaacgacagcgcgctggggctgtttaatggc
gatatcggtattgcgctggaacgaggggaggggctgcgggtctggttcccgatgccggat
ggcagcattaaatcggtgcagccaagtcgtttgccggagcacgacaccgcctgggcgatg
acggtgcataaatcgcaggggtcggagtttgaccatgcggcgttgattctgcccgccaaa
atcgtaccgctggtcacccgcgagctggtctataccgcgatcacgcgggcaaaacagcgg
ctctcgatttatgccgatgaacaggtgctaacccagtccatcgtcgcccgtaccgagcgg
cgcagcgggctggcggacatttttgccagcggcgtgtaa
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