Raoultella sp. X13: DSD31_05140
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Entry
DSD31_05140 CDS
T05540
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rao
Raoultella sp. X13
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rao03009
]
DSD31_05140
Enzymes [BR:
rao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DSD31_05140
Ribosome biogenesis [BR:
rao03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DSD31_05140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
RrnaAD
TRM5-TYW2_MTfase
PCMT
MTS
Cons_hypoth95
Methyltransf_11
Methyltransf_4
Methyltransf_23
FtsJ
Methyltransf_15
PrmA
Methyltrans_SAM
TPMT
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
AXC28899
LinkDB
All DBs
Position
1050604..1051908
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AA seq
434 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVTVNDLDPFGQGVARHHGKALFVNGLLPQEQAEVVVVEDKKQ
YSRAQVKRRLNDSPQRQTPRCPHFGTCGGCQQQHASVELQQQSKRAALARLMKRDVDDII
AASPWGYRRRARLSLNYQPKTQQLQMGFRQAGSSDIINVVQCPILAPDLEALLPAVRECL
SGLKSTRQLGHVELVLADNGPLMVLRHTAALPAGDKEKLERFSQSHGLALYLAPQSEILE
HISGEAPWYTSDGLRLMFSPRDFIQVNDGVNQLMVQTALAWLDIQPQDRVLDLFCGMGNF
TLPLATRAANVVGVEGVPALVAKGRENAALNQLHNVTFFHENLEEDVTRQAWAQHGFDKI
LLDPARAGAPGVMSHIIKLAPRRVVYVSCNPATLARDSDLLLQAGYQIQRLAMLDMFPHT
GHLESMVLFEHRDT
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacggcgtgtgacgacgcgccagatcataaccgtaaca
gtcaatgacctcgacccctttggtcagggcgttgctcgtcaccatggtaaagcgctattt
gttaatggcttattgccccaggaacaggctgaagttgtcgtggttgaagacaaaaaacag
tactcccgggcgcaggtaaaacgccgtcttaatgacagcccgcagcgccagacgccgcgc
tgcccgcatttcggtacctgcggcggctgccagcaacagcatgccagcgttgagctccag
cagcaaagtaaacgcgcagcgcttgcccggctgatgaagcgggatgtcgacgacattata
gccgcttcgccgtggggatatcgccggcgcgcacgtctgagcttgaattatcagccaaag
acccaacaattacagatgggctttcgccaggctggctccagcgacattatcaatgtggtg
cagtgccccattttggcgcccgatcttgaggcattgctgccagcggtgcgcgagtgtttg
tccggcctgaaatcaacgcgtcagctcgggcatgtcgagctggtgctggcggacaatggc
ccgctgatggtcctgcgccacacggcagcattaccggccggcgataaagaaaaactggaa
cgattttcgcaatctcacggtctcgctctgtacctggcgccgcaaagcgagatactggaa
catattagtggggaagccccatggtatacctcagacgggctacgcttaatgtttagtccg
cgcgactttatccaggtgaacgatggcgtcaatcagctgatggtgcaaacggcgctggcg
tggctggatattcagcctcaggatcgggtgctcgatctgttctgcgggatggggaatttt
accctgccgctggctacgcgtgcggccaatgtcgtgggcgttgaaggcgtcccggcgctg
gttgcgaaagggcgggaaaacgccgcgctcaatcagctgcacaacgtgacattctttcat
gaaaatctggaagaagatgtgacccgccaggcctgggcgcagcatggttttgataaaata
ttactcgacccggcgcgagccggagcgccgggcgtgatgtcacacattataaaacttgcc
ccgcgtcgcgtcgtctatgtctcctgtaatccggcgaccctggcgcgcgatagcgacctg
ctgctgcaggcggggtatcagattcaacgcctggcaatgctggacatgttcccgcatacc
ggacatctggaatcaatggtgttgtttgagcacagagatacatag
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