Raoultella sp. X13: DSD31_06335
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Entry
DSD31_06335 CDS
T05540
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
rao
Raoultella sp. X13
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rao03009
]
DSD31_06335
Enzymes [BR:
rao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DSD31_06335
Ribosome biogenesis [BR:
rao03009
]
Prokaryotic type
rRNA helicases
DSD31_06335
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-ProteinID:
AXC29114
LinkDB
All DBs
Position
complement(1292831..1294156)
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AA seq
441 aa
AA seq
DB search
MTVTTFSELELDENLLEALQEKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAAHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEEPIEVSASPSTRERKKIHQWYYRADDIKHKTALLV
NLLKQSDATRSIVFVRKRERVHELASWLREAGINTCWLEGEMVQAKRNEAIKRMTDGRMN
VLIATDVAARGIDIPDVSHVFNFDMPRTADTYLHRIGRTGRAGKKGVAISLVEAHDHLLL
GKIGRYIDEPLKARVIDELRPTTRAPSEKLTGKPSKKVLAKRAEQKKEKDKEKPRVKKRH
RDAKNIGKRRKPSGSAGENQQ
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaaaccttctggaagccctccag
gaaaaaggtttcacacgcccgacagccattcaggccgccgctattccgcctgcgcttgat
ggccgtgatattctcggttcagccccgacaggtaccggtaaaacagcggcgtatctgctg
ccagcgttgcagcacctgcttgatttcccgcgtaagaagtcgggaccaccgcgtattctt
atcctgacgccgacccgtgagctggcaatgcaggttgccgaccatgcccgtgagctggcc
gcacacacgcacctggacattgccaccatcaccggcggtgtcgcatacatgaaccacgcg
gaagtattcagcgagaaccaggatattgtggtcgcgaccaccggccgactgctgcaatac
attaaagaagaaaacttcgactgccgggcggtcgaaacgctgatcctcgatgaggcggac
cgtatgctggatatgggcttcgcgcaggatatcgagcacattgccggtgaaacccgctgg
cgtaagcagaccatgctgttttccgcgactctcgaaggcgatgcgattaaagactttgcc
gagcgcctgctggaagagcccattgaagtttccgccagtccttccacgcgcgaacgtaag
aaaattcatcagtggtactatcgcgccgatgacattaagcataaaaccgcgttactggtt
aacctgctgaaacagtcggatgcgacccgctctatcgtctttgtgcgtaagcgcgagcgc
gttcatgaactggcctcctggctgcgcgaagcggggatcaatacctgctggctggaaggc
gaaatggtgcaggccaagcgtaacgaagcaatcaaacgtatgaccgacggtcgtatgaat
gtgctgattgccaccgatgttgctgcccgcgggatagatattccggacgttagccacgtt
ttcaacttcgacatgccgcgcacggcggatacctatctgcatcgaatcggacgcaccggc
cgcgcggggaaaaaaggcgtcgccatttctctggttgaagctcatgaccatctgctgttg
ggtaaaattggtcgctatatcgacgagccgctcaaagcgcgcgttattgatgaactgcgc
ccgacgacccgcgcaccgagtgagaagctgaccggtaagccgtccaaaaaggtactggct
aaacgcgccgagcagaaaaaagagaaagataaagagaaaccgcgagtgaaaaaacgtcac
cgcgatgccaaaaatattggcaagcgccgtaaaccaagcggcagcgctggtgaaaatcag
cagtaa
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