Raoultella sp. X13: DSD31_08125
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Entry
DSD31_08125 CDS
T05540
Name
(GenBank) methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
rao
Raoultella sp. X13
Pathway
rao00450
Selenocompound metabolism
rao00970
Aminoacyl-tRNA biosynthesis
rao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DSD31_08125
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DSD31_08125
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rao01007
]
DSD31_08125
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rao03016
]
DSD31_08125
Enzymes [BR:
rao01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
DSD31_08125
Amino acid related enzymes [BR:
rao01007
]
Aminoacyl-tRNA synthetase
Class I (U)
DSD31_08125
Transfer RNA biogenesis [BR:
rao03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DSD31_08125
Prokaryotic type
Other AARSs
DSD31_08125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
Anticodon_1
zf-ANAPC11
Motif
Other DBs
NCBI-ProteinID:
AXC29433
LinkDB
All DBs
Position
complement(1675851..1677884)
Genome browser
AA seq
677 aa
AA seq
DB search
MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGNEVNFICADDAHGTPIM
LKAQQLGVSPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYGRLKENGFI
KNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSG
ATPVMRESEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFG
FEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSESFDAYWKKDSDAELYHFIGKDIVY
FHSLFWPAMLEGSGFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYY
TAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGMLSAELADPALYK
TFTDAAASIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVARQEGRDADLQAICTM
GLNMFRVLMTWLKPVLPQLTARAEAFLNSELNWDAIQQPLLSHKVNTFKALYNRIEMKQV
EALVDASKEEVKATAAPVTGPLADDPIQDTITFDDFAKVDMRIALIENAEFVDGSDKLLR
LSLDLGGEKRNVFSGIRSAYPDPQVLIGRLTVMVANLAPRKMRFGISEGMVMAAGPGGKD
IFLLSPDSGAQPGQQVK
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagtcgcgaagaaaattctggtaacgtgcgcgctgccgtacgctaacggctca
atccacctcggccacatgctggagcacatccaggctgatgtctgggtccgttaccagcga
atgcgcggcaacgaggtcaatttcatctgtgctgacgacgcccacggcacgcctatcatg
ctgaaagctcagcagcttggcgtctctccggagcagatgattggcgaaatgagtcaggag
catcagaccgattttgcgggctttgatattagctacgacaactaccactcgacgcacagc
gacgagaaccgcgagctgtctgagctgatctacggccgcctgaaagagaacggttttatc
aaaaaccgcaccatctctcagctttacgatccggaaaaagggatgttcctgccggaccgt
ttcgtgaaaggcacctgtccgaagtgtaaatcaccggatcagtatggcgataactgcgaa
gtgtgcggcgcgacctacagcccgaccgagctgatcgacccgaaatcggtggtttccggg
gcgaccccggtgatgcgtgaatccgagcacttcttcttcgacctgccgtcctttagcgaa
atgctgcaggcgtggacccgcagcggcgcgctgcaggagcaggtggcgaacaaaatgcag
gagtggttcgagtccggtctgcagcagtgggacatttcccgcgacgcgccgtactttggc
ttcgaaatccccaacgcgccgggcaaatatttctacgtctggctggatgcgccgatcggc
tacatgggctccttcaagaacctgtgtgacaaacgcggcgatagcgaaagctttgacgcc
tactggaagaaagactccgacgccgagctgtatcactttatcggcaaagatatcgtctac
ttccacagcctgttctggccggcgatgctggaaggcagcggtttccgcaagccgaccaac
ctgttcgttcacggttacgtcaccgtcaacggcgccaagatgtccaaatcacgcggcacc
tttatcaaggccagcacctggctgaaccattttgacgccgacagcctgcgttattactac
accgccaagctctcttcgcgcatcgatgatatcgacctgaacctggaagatttcgtgcag
cgcgtgaacgccgacatcgtcaacaaagtggtaaacctcgcctcgcgcaacgccggtttt
atcaataagcgtttcgacggcatgctgtccgctgagcttgccgatccggcgctgtacaaa
accttcaccgatgcggcagcaagcattggcgaagcgtgggacagccgcgagttcggtaaa
gccatccgtgaaatcatggcgctggccgacgtggctaaccgctacgttgacgagcaggca
ccgtgggtcgtcgccagacaggaaggccgcgacgccgatctgcaggctatctgcaccatg
ggcctgaatatgttccgcgtgctgatgacctggctcaagccggtcctgccgcagctgacc
gcccgcgccgaagccttcctcaacagcgaactgaactgggatgctatccagcagccgctg
ctgtcgcataaggtcaacaccttcaaggcgctgtacaaccgcatcgagatgaagcaggtt
gaagccctggtcgacgcgtcgaaagaagaggtgaaagccaccgccgcaccggttaccggt
ccgctggcggacgatccgattcaggacaccatcacctttgacgatttcgccaaagtggat
atgcgcatcgcgctgattgaaaacgccgaatttgttgatggttctgacaagctgctgcgc
ctgagcctcgatctgggcggcgagaaacgtaacgtcttctccggcattcgtagcgcctac
ccggatccgcaggtgttgattggtcgcctgacggtgatggtggccaacctggcgccgcgt
aaaatgcgtttcggcatctcggaagggatggtgatggcagcgggccctggcgggaaggat
atcttcctgttaagccctgacagcggcgcccagccgggtcagcaggtaaaataa
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