Raoultella sp. X13: DSD31_08495
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Entry
DSD31_08495 CDS
T05540
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rao
Raoultella sp. X13
Pathway
rao00521
Streptomycin biosynthesis
rao00523
Polyketide sugar unit biosynthesis
rao00525
Acarbose and validamycin biosynthesis
rao00541
Biosynthesis of various nucleotide sugars
rao01100
Metabolic pathways
rao01110
Biosynthesis of secondary metabolites
rao01250
Biosynthesis of nucleotide sugars
Module
rao_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
rao_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DSD31_08495 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DSD31_08495 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DSD31_08495 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DSD31_08495 (rfbB)
00525 Acarbose and validamycin biosynthesis
DSD31_08495 (rfbB)
Enzymes [BR:
rao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DSD31_08495 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AXC29500
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All DBs
Position
1774465..1775529
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AA seq
354 aa
AA seq
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MKILVTGGAGFIGSAVVRHIIENTQDDVRVVDCLTYAGNLESLASVADNERYSFSRTDIT
DAQGIAEQFSEFQPDIVMHLAAESHVDRSIDGPAAFIQTNLIGTFTLLEATRHYYASLNE
ARKTSFRFHHISTDEVYGDLEGTDDLFTEETPYAPSSPYSASKAGSDHLVRAWNRTYGLP
VVVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGQQIRDWLYVEDHARALYKVAT
EGQNGETYNIGGHNERKNIDVVKTICAILDKVVETKPGNISQFADLITFVTDRPGHDLRY
AIDATKIARDLGWVPLETFESGIEKTVRWYLDNPTWWQRVLDGSYAGERLGLNN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccttgtcaccggtggcgctgggtttattggttctgccgttgttcgtcatatt
attgagaatacccaggacgatgtacgcgttgtggactgcctgacctatgcaggtaatctc
gaatctctggcctcagtagccgataatgaacgctattctttctcgcgtacggatattacc
gacgcccaggggattgcagagcagttcagtgagtttcaacctgatattgtgatgcatctg
gcggcagaaagtcatgtcgatcgttccattgatggcccggcggcttttatccagaccaac
cttattggtaccttcacgctgctggaagcaacgcgtcattattacgcctctttgaatgaa
gcgcggaaaaccagtttccgcttccaccatatttcgacggatgaggtttatggtgatctg
gaaggtactgacgatttattcaccgaagagacgccgtacgcaccgagcagcccttactct
gcctctaaagccgggagtgaccatctggtgcgcgcctggaaccgcacctacggtctgccg
gtggtggtgaccaactgctcgaacaactacggtccctatcatttcccggaaaaactgatc
ccgctgaccatccttaacgcgctggcgggcaaaccgctgccggtatatggcaacggccag
caaattcgtgactggctttacgtggaagatcacgcccgggcgctgtataaagtcgctacc
gaaggtcagaacggtgaaacctataacatcggtggtcataatgaacgcaaaaacatcgat
gtagtgaaaaccatatgtgccattctcgataaggttgttgagacgaagccaggcaacatc
agccagtttgcagacctgattacctttgtgaccgaccgccctggccatgacctgcgttac
gcgattgatgcgacaaaaattgcgcgcgatctcggttgggtaccgctggaaaccttcgaa
agcgggattgagaaaacggtccgctggtatctggataacccgacgtggtggcagcgcgtg
ctggacggctcctatgccggtgaacgcctgggtctgaataactaa
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