Raoultella sp. X13: DSD31_09015
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Entry
DSD31_09015 CDS
T05540
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rao
Raoultella sp. X13
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rao03400
]
DSD31_09015
DNA repair and recombination proteins [BR:
rao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
DSD31_09015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
AXC29594
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All DBs
Position
1901009..1901509
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AA seq
166 aa
AA seq
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MKPVDVHDKATRSKNMRAIGQRDTAIEKRLAALLAQAGFTFTVQDATLPGRPDFVVPEYR
CAIFAHGCFWHHHRCYLFKVPATRTAFWLEKIGKNVARDSRDIMRLQEQGWRVLIVWECA
LRGRLKLSDEALTERLEEWICGGGHRAQIDTQGIGEPELTSPPHKA
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggtggacgtccacgataaagccacgcgcagtaaaaacatgcgggcgattggc
cagcgcgatacggcgatcgaaaaacgccttgccgcgctgctcgctcaggccggatttacg
tttaccgttcaggatgcgaccctgccggggcggccggactttgtcgtgccagagtaccgc
tgcgctatctttgcccacggctgtttctggcatcaccatcgttgctatctgtttaaagtg
cccgcaacgcgcacggcgttctggctggagaaaattggcaagaacgtcgcgcgcgatagc
cgcgatatcatgcgcttgcaagagcaggggtggcgggtgctgatcgtctgggaatgtgcg
ctgcgcgggcgactgaagctgagcgatgaggcgctgactgagcgtctggaagagtggatc
tgcggcggcggtcaccgcgcgcagatcgacacgcagggcattggcgagccagagcttact
tctccacctcacaaggcgtaa
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