Raoultella sp. X13: DSD31_09620
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Entry
DSD31_09620 CDS
T05540
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rao
Raoultella sp. X13
Pathway
rao00061
Fatty acid biosynthesis
rao00071
Fatty acid degradation
rao01100
Metabolic pathways
rao01212
Fatty acid metabolism
rao02024
Quorum sensing
rao04146
Peroxisome
Module
rao_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DSD31_09620
00071 Fatty acid degradation
DSD31_09620
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DSD31_09620
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSD31_09620
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rao01004
]
DSD31_09620
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rao04147
]
DSD31_09620
Enzymes [BR:
rao01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DSD31_09620
Lipid biosynthesis proteins [BR:
rao01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DSD31_09620
Exosome [BR:
rao04147
]
Exosomal proteins
Exosomal proteins of breast milk
DSD31_09620
Exosomal proteins of breast cancer cells
DSD31_09620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AXC29704
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All DBs
Position
2014776..2016461
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AA seq
561 aa
AA seq
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MKKVWLNRYPADVPAEINPDRYQSLVELFEHAATRYADQPAFINMGEVMTYRKLEERSRA
FAAYLQQGLGLQKGDRVALMMPNLLQYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDS
GAAAIVIVSNFAHTLEKVVEKTQVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHL
PDAISFRSALHAGYRMQYVKPDIVCADLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNA
TYGPLLHRGKEFVVTALPLYHIFALTMNCLLFIELGGQNLLITNPRDIPGLVKELAKYPF
TAMTGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGYGLT
ECAPLVSVNPHDIDYHSGSIGLPVPSTEAKLVDDDDNEVAPGQPGELCVKGPQVMLGYWQ
RPDATAEIIKNGWLHTGDIAVMDDEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHSGV
QEVAAVGVPSGSSGEAVKIFVVKKDASLTEEALITFCRRQLTGYKVPKLVEFRDELPKSN
VGKILRRELRDEARAKVDNKA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaggtttggctaaaccgctatcccgccgatgttccggcggagataaatcctgac
cgctaccaatccctggttgaattatttgaacatgccgccacgcgctacgccgaccaaccg
gcgtttatcaacatgggcgaggtgatgacctaccgtaagctggaggagcgcagccgggcg
ttcgccgcttatcttcagcaggggctggggctgcaaaagggcgatcgcgtcgcgctgatg
atgcctaacctgttgcaataccccattgcgctcttcggtattctgcgcgcggggatgatt
gtggtgaacgtcaatccgctgtatacgccgcgtgagcttgaacatcagctgaatgacagc
ggggcggcggcgattgtgatcgtctccaactttgcccataccctggagaaagtggtcgag
aaaactcaggttaaacatgtgatcctgacccggatgggcgatcagctctcgacagcgaaa
ggcaccctggtgaatttcgtggtgaagtacatcaagcgcctggtgccgaagtatcacctc
cccgatgcgatctctttccgcagcgcgctgcatgccggttatcgcatgcagtacgttaaa
cccgacattgtctgtgccgatctggctttcctgcagtacaccggtggtactaccggcgtg
gcgaaaggggcaatgctcacccaccgcaatatgctggctaacctcgagcaggtgaatgcg
acctacgggccgctgctacatcgtgggaaagagtttgtcgtgacggcgctgccgctgtac
cacatttttgcgctgaccatgaactgcctgctgttcattgagctcggcggccagaacctg
ctgattaccaacccgcgtgatatcccggggctggtcaaagagctggcaaaatacccgttc
accgcaatgaccggggtcaatacgctgttcaacgccttgcttaacaacaaagagtttcag
cagctcgatttctcttctctgcatctttccgccggcggcggaatgccggtgcagcaggtg
gtggccgagcggtgggttaagctcaccggtcagtatctgctggagggctatggcctgacg
gagtgcgcgccgctggtcagcgtgaacccgcacgatattgactaccacagtggcagtatc
gggctgccggttccgtcgaccgaagcgaagctggtggacgatgacgataatgaggtcgcg
ccgggccagccgggcgagctgtgcgtgaaaggcccgcaggtgatgctgggctactggcag
cgccccgatgcgaccgctgaaatcatcaaaaacggctggctgcataccggcgatattgcg
gtgatggacgatgaaggctttttgcgcatcgtcgatcgcaaaaaagatatgattctggtc
tccgggtttaacgtctatccgaacgaaatcgaagatgtggtgatgcagcattcgggcgtt
caggaggtggctgccgttggcgtaccgtcgggaagcagcggtgaagcggtgaagattttc
gtcgtcaagaaagacgcgtcgctgaccgaagaggcgctgatcaccttctgccgccgccag
ctgaccggatacaaagtaccgaaactggttgaattccgtgatgaactgccgaaatccaat
gttggaaaaattttacggcgagaactgcgtgacgaagcccgcgctaaagtagacaataaa
gcctaa
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