Raoultella sp. X13: DSD31_12435
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Entry
DSD31_12435 CDS
T05540
Name
(GenBank) M20 family peptidase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rao
Raoultella sp. X13
Pathway
rao00300
Lysine biosynthesis
rao01100
Metabolic pathways
rao01120
Microbial metabolism in diverse environments
rao01230
Biosynthesis of amino acids
Module
rao_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DSD31_12435
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rao01002
]
DSD31_12435
Enzymes [BR:
rao01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DSD31_12435
Peptidases and inhibitors [BR:
rao01002
]
Metallo peptidases
Family M20
DSD31_12435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
NDUF_B12
Motif
Other DBs
NCBI-ProteinID:
AXC30227
LinkDB
All DBs
Position
complement(2607434..2608546)
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AA seq
370 aa
AA seq
DB search
MTTTLQLARQLLGFNTINPPGSEADCMRFFADWLQESGFEVSLSSFGEGRSNLIASLPGM
TAGKPLAFTGHLDTVPLGNAQWRYDPFGSQTEDGRLYGRGASDMKAAVAAFAVACVHQRE
TILAGSGAVLLITGGEETGCDGARALIASAPLPEIGALIVGEPTANYPVIGHKGALWLRC
ETRGKTAHGAMPELGINAIYLAADAVGKIQHFSPGAPHPLMKQPTLNVGRIEGGLNINSV
PDRTRFDVDIRSAPNLQHATIRQRLTTLLGESVTVSTLVDLPAVLSEADHVWIKQVYQRC
QPLHDRPLEPRVVPYFTDASLLLPALGNPPCIILGPGEPSLAHQTDEYCLLSRLEEAEQL
YGEIIRDWMR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacccttcaactggcccggcagctgctgggctttaacaccatcaacccgccg
ggtagcgaagctgactgcatgcgcttctttgccgactggcttcaagagagcggctttgag
gtttcgctgtcgtcgttcggcgagggacgcagcaatctgatcgccagtctgcccgggatg
acagccggtaaaccgctggcttttaccggacatctggataccgtgccgcttgggaacgcg
cagtggcgatacgatcctttcggttcacagacggaggacggtcgtctttatggacgcggc
gccagcgatatgaaagcagcggtggcggcatttgccgtcgcctgcgttcatcagcgggaa
actattctcgccggcagcggtgcggtattgctgattaccggaggggaagaaaccggctgt
gacggcgcccgggcgctgatcgcctccgctccgttgccggagatcggggcgctgatcgtc
ggcgaacccaccgccaattacccggttatcgggcataaaggcgccctctggctacgttgt
gaaacgcgagggaaaaccgcgcacggcgcgatgccggaactggggattaacgctatctat
ctggcggcggatgcggtaggtaagattcaacatttctcgccaggcgcgccgcatccgctg
atgaaacagcccactcttaacgtcggacgtatcgaaggcgggctcaatatcaactccgtg
ccggaccgcacgcgttttgatgtcgatatccgtagcgcgcccaatttacagcacgccact
atccggcagcgattgaccacgctgcttggtgagagcgtcacggtgtcgacattggttgac
ctgcccgcggtactgagcgaagcggaccacgtttggataaagcaggtttatcaacgctgc
cagccgctgcacgatcggccgcttgagccgcgcgtggttccctactttaccgatgcctcc
ctgctgctgcctgcgctgggcaacccgccctgtattattctcggccccggcgagccgtct
ctggctcatcaaaccgatgagtactgcctgctcagccgactggaggaagcggaacagctg
tacggagaaattatccgcgactggatgcggtaa
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