Raoultella sp. X13: DSD31_16830
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Entry
DSD31_16830 CDS
T05540
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rao
Raoultella sp. X13
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rao03032
]
DSD31_16830 (ihfB)
03036 Chromosome and associated proteins [BR:
rao03036
]
DSD31_16830 (ihfB)
03400 DNA repair and recombination proteins [BR:
rao03400
]
DSD31_16830 (ihfB)
DNA replication proteins [BR:
rao03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSD31_16830 (ihfB)
Chromosome and associated proteins [BR:
rao03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DSD31_16830 (ihfB)
DNA repair and recombination proteins [BR:
rao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DSD31_16830 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
HAAS
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
AXC31015
LinkDB
All DBs
Position
complement(3538048..3538335)
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AA seq
95 aa
AA seq
DB search
MTKSELIERLASQQSHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYEE
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaattgatagaaagacttgccagccagcaatctcacattcctgcgaaa
gcggtcgaagatgctgttaaagaaatgctggaacatatggcctcaacgcttgctcaaggt
gagcgcattgaaatccgcggtttcggcagcttctctttgcattatcgagcacctcgcacc
gggcgtaacccgaagactggcgataaagtcgaactggaaggtaagtacgttccgcacttt
aagcctgggaaagaattacgcgaccgcgccaatatttacgaagagtaa
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