Raoultella sp. X13: DSD31_16860
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Entry
DSD31_16860 CDS
T05540
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
rao
Raoultella sp. X13
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rao03009
]
DSD31_16860
Ribosome biogenesis [BR:
rao03009
]
Prokaryotic type
ribosomal protein modification factors
DSD31_16860
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AXC32777
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Position
3544625..3546385
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AA seq
586 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQKLLDLGFDIEEASWLNPVPHVWSVHIRDKECSLCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTEDDEVPEG
LLDPRLRAFYDPDDQLTASMLVDLQSGNDERGVCGLPFTRQSDGETVYIPMNIVGNLYVS
NGMSAGNTANEARVQALSEVFERHIKNRIIAESISLPEIPAEVMARYPGVVESINKLEAE
GFPIFAYDGSLGGKYPVICVVLFNPTNGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKQDADYPFVDWSFSGTTEEEFATLM
AIFKEEDKEVYIADYEHLSVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETLLSLPGS
EWEKEDYLALIEQLDDEGNDDFTRVRELLGLATGKDNGWYTLRIGELKAMLALAGGDLEQ
ALIWTEWTIEFNASIFSAERANYYRCLQTLLLLSQEEERQPLQYLNAFIRMYGADAVEAA
SAAMSGEAPFYGLQAVDSDLQAFPAHQSLLKAYEKLQRAKAAFWAK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaacgtttattcccggcaaagatgccgccctggaagattccatcgcccgcttc
cagcagaaattgctcgacctcggatttgatattgaagaggcctcatggctgaatcccgta
ccgcacgtgtggtcagtacatatccgtgataaagagtgctcgctgtgtttcaccaacggc
aaaggggcaaccaaaaaagcggcgctggcctcggctcttggtgaatatttcgagcgtctg
tccaccaactacttttttgctgacttttggctgggcgaaaccatcgctaacggaccattc
gtccactatccaaatgagaaatggttcccgctgaccgaagacgatgaagtgccggaaggt
ctgctggatcctcgtctgcgcgcattttacgatcctgacgatcagttgaccgccagcatg
ctggtcgatctgcagtcgggcaacgacgaacgcggcgtttgcggcctgccgttcacccgc
cagtccgatggcgaaaccgtctatatcccgatgaatatcgtcggcaacctgtatgtctct
aacgggatgtccgcaggcaacacggcgaacgaagcgcgcgttcaggcactgtcggaagtc
ttcgagcgtcacattaaaaaccgcatcatcgctgagagcatcagcctgccagaaattccg
gcagaggtcatggcgcgttatccaggtgtggtggagtccatcaataagctggaagccgaa
ggtttcccgatctttgcttacgatggctcgctgggcggcaaatacccggttatctgcgtg
gtgttgtttaacccgaccaacggaacctgcttcgcctctttcggcgcgcatccggacttc
ggcgtcgctctcgaacgtaccgtcaccgagctgctgcaaggccgtagcctgaaagatctc
gatgtctttacgccaccaaccttcgatgacgaagaagtcgctgaacacgccaatcttgaa
acccactttattgattccagcggtctgatctcctgggatatgttcaaacaggatgctgac
tatccgttcgtcgactggagcttctccggcaccacggaagaagagttcgccaccctgatg
gccatctttaaagaagaagataaagaagtttacatcgccgattatgagcacctgagcgtc
tacgcctgccgcatcatcgttccgggaatgtcagacatttacccggcggaagatctgtgg
ctggccaataacagcatgggcagccatctgcgcgaaacccttctctccctgccgggcagt
gaatgggaaaaagaagattatctggcgctgatcgaacaactggatgatgaagggaatgac
gacttcacccgcgtacgcgagctgctgggcctggcgacgggcaaagacaacggctggtat
acgctgcgtattggcgaactgaaagcgatgctggcgctggccggtggcgatctggagcag
gccttgatctggacggaatggaccattgaattcaatgcgtctatcttcagtgcggaacgc
gcaaattactaccgctgcctgcagacgctgctgctgctcagtcaggaagaagaacgccag
cctctgcagtacctgaatgcctttatccgtatgtacggcgccgatgcggtagaagctgcc
agcgcggcgatgagcggtgaagcgccgttctatggcctgcaggccgtagatagcgatctc
caggctttcccggcccatcagtctttactgaaagcctatgaaaaactgcagcgggcaaaa
gcggcattctgggctaaataa
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