Raoultella sp. X13: DSD31_17275
Help
Entry
DSD31_17275 CDS
T05540
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rao
Raoultella sp. X13
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rao03009
]
DSD31_17275
Enzymes [BR:
rao01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DSD31_17275
Ribosome biogenesis [BR:
rao03009
]
Prokaryotic type
ribosomal protein modification factors
DSD31_17275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Methyltransf_2
CLP1_P
YajR_YAM
RNase_II_C_S1
PrmA
Motif
Other DBs
NCBI-ProteinID:
AXC31095
LinkDB
All DBs
Position
3634342..3635667
Genome browser
AA seq
441 aa
AA seq
DB search
MSNVTHQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPTYDNADMVIVNTCGFIDSAV
QESLEAIGEALKENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYTPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR
LADAGVKELLVISQDTSAYGVDVKHRTGFHDGAPVKTSMVSLCEELAKLGIWVRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSADRQLARIKQWREICPDLTL
RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGATANELADQVPEEVKEERW
NRFMQLQQQISAERLQEKVGREIMVLIDEVDEEGAIGRSMADAPEIDGAVYLNGETKVKP
GDVVRVKVEHADEYDLWGSRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtaacgcatcagccgaagatcggctttgtctctctgggctgcccgaaaaac
ctcgtggactcagaacgcatcctgaccgaactgcgtaccgaaggttatgacgtggtcccc
acctacgacaatgccgatatggttatcgtcaacacctgcggctttatcgacagcgccgtt
caggagtctctggaagccattggcgaagcgttaaaagaaaatggcaaagttattgtgacc
ggctgcctgggcgcgaaagaagaccagattcgcgaagtgcatccgaaagtgctggagata
accgggccgcacagctatgaacaggttctggagcatgtccatcactatacgccgaagccg
aaacacaacccgttcctgagcctggtgccggaacagggcgtgaagctcacgccacgtcat
tacgcctacctgaaaatttccgaaggctgtaaccatcgctgcaccttctgcattatcccg
tcgatgcgcggcgaccttgtcagccgtccgattggtgaagtgctgtccgaagccaaacgc
ctggccgatgccggcgtcaaagagctgctggttatctctcaggatacctccgcctacggc
gtcgatgtgaagcatcgcaccggctttcacgacggcgcgccggtaaaaaccagcatggtc
agcctgtgcgaagagctggcgaaactgggtatctgggtccgtctgcactacgtctacccg
tacccgcacgtcgatgacgtgattccgctgatggcggaaggtaaaattctgccgtatctg
gatatcccgctgcagcatgccagcccgcgcattctgaaactgatgaaacgtccgggttct
gccgaccgtcagctggcacgcattaagcagtggcgtgaaatctgccctgacctgaccctg
cgttcgaccttcatcgtcggcttcccgggtgaaacggaagaagatttccagatgctgctc
gacttcctgaaagaggcacgcctggaccgcgtcggctgctttaagtacagcccggttgaa
ggcgcgaccgctaatgagctggcggatcaggtgcctgaagaggtaaaagaagagcgctgg
aaccgctttatgcagctgcagcagcagatctccgccgaacgtctgcaggagaaggtcggc
cgcgagatcatggtgctgatcgatgaagtggacgaagaaggcgccattggccgcagtatg
gccgatgccccggaaattgacggtgcggtctacctgaacggcgaaacgaaggtcaaacca
ggcgacgtcgtccgtgtgaaagtcgaacatgccgacgaatacgacctgtggggcagccgg
gtttaa
DBGET
integrated database retrieval system
