Raoultella sp. X13: DSD31_20120
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Entry
DSD31_20120 CDS
T05540
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rao
Raoultella sp. X13
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rao03400
]
DSD31_20120
DNA repair and recombination proteins [BR:
rao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DSD31_20120
Archaeal homologous recombinant proteins
DSD31_20120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
T2SSE
AAA_21
nSTAND3
ABC_tran
cobW
ABC_ATPase
TsaE
NTPase_1
AAA_15
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXC31617
UniProt:
A0A808Y831
LinkDB
All DBs
Position
4232150..4235308
Genome browser
AA seq
1052 aa
AA seq
DB search
MKILSLRLKNINSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSSVSQSQNDLMTRDTAECLAEVEFEVKGTAYRAFWSQNRARNQPEGNLQAPRVELARCD
DGQILADKVKDKLELTASLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAQVFEKHKLARNELEKLQAQASGVLLLSDEQQQALQQSLQALTDEERLQLSEQS
RLQAAQQWLLRQQELSAEASQAQVRLQDAQQALDQAQPQLAALLNAQPAEQLRPLWTRQQ
EQSAALAQTHRQVEEVNTRLQDRLRLRAGIRLAASRQMTRLQDAHHALNLWLNEHDRYRQ
WGNSLAGWRAVFQQQASDARQQNVVQQSLAEIARKLAELPPATLTLDADQVTASLAQHAA
ARPLRQQLSTLHSRLLPLRQRQQQLQTTEQARREEQEKLETTLAQRRLAYKEKHQQFSDV
KAICELEARIVGLEEERARLQPGAPCPLCGSSEHPAVAQYRALEPGVNQARRDSLEREVK
QLAEEGAQLRGQLEALLKQQVKEKEELDSLLQQEQALTSQWQTTVSGLHCDLQPQDDIPG
WLAAQQESEQQLYQHQQRLAWQARQQAGEQQLRQLQQEQEQRRAQLETELSPFALSVPQA
DRTAEWLAQREAESRLWQEQQNQSVALQEQLQQLTPLLETLPPTEPEPLPSTDEIADPAP
LTGWRQVHDDCLALQSQWRTLSQQESQQQEALRETQTRFAAALSSSPFADQQAFLAALLD
EETRQRLERLKQALENAVQQNNALALRARDALARHQQQPPTDVDLTLPLEQVQVRLLQLA
PQLRENSARQGEIRQQLKQNAGNQQRQQALHQEIALAGQQLEDWAWLNALIGSKEGDKFR
KFAQGLTLDNLVWLANHQLNRLHGRYQLQRKASEALELEVVDTWQADAVRDTRTLSGGES
FLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKVIGVISH
VEAMKERIPVQIKVKKINGLGYSRLDKMFSIE
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattctgagtttgcgcctgaaaaatatcaactcgttaaaaggcgaatggaaaatc
gacttcaccgcagaaccgttcgccagcaacgggctgtttgccatcaccggccccaccggc
gccgggaaaaccactctgctggacgcgatctgcctcgcgctgtatcacgaaacgccccgt
ctgagcagcgtgtcgcaatcgcaaaacgatctgatgacccgcgataccgccgagtgtctg
gcggaagtggaattcgaggtcaaagggacggcctatcgcgccttctggagccagaaccgc
gcccgcaatcagccggagggcaacctgcaggccccgcgcgttgagctggcccgctgcgac
gatgggcagatccttgccgataaagtcaaagataagctcgaactgaccgcttcgctcacc
ggactggattacggtcgctttacccgctcaatgctgctgtcgcaaggccagttcgccgcg
ttcctcaacgccaaaccaaaagaacgcgctgagctgctggaagagctgaccggcaccgaa
atctatggccaaatttcagcacaggtgtttgaaaagcataagcttgcccgcaacgaactg
gagaaacttcaggcccaggcctccggcgttctgctgctgagtgatgagcagcagcaggcg
ctacagcaaagtttgcaagcacttactgatgaagagcgtctacagctttcggagcaatcc
cgcctgcaggcggcgcagcagtggctgctgcgccagcaggagctcagcgcggaagcctcg
caggctcaggtccggctgcaggacgcgcagcaggcgctggatcaggcccagccgcagctt
gcagcgctgctcaacgcgcagccggcagagcagcttcgtccgctgtggacccgacagcag
gaacaaagcgccgcgctggcgcaaacccaccgccaggtggaggaagtgaatactcgctta
caggacaggctgcggctgcgcgccgggatccgccttgccgccagccggcagatgacccgc
ttgcaggatgcccatcacgccctcaacctgtggcttaacgaacacgatcgctatcgccag
tggggaaactcgctggcgggctggcgggccgtcttccagcagcaggcgagcgatgcccgg
caacagaacgtcgtgcaacagagcctggcggaaatcgcccgcaagctggcagagctgccg
cctgcgacgctgacgctggatgccgaccaggtcaccgccagcctggcgcagcacgccgcc
gcccgcccgttacgccagcagctttcgacgctgcatagccgcctgttgccgcttcgccag
cgtcagcagcagctgcaaaccacggagcaggctcgtcgtgaggaacaggaaaagctggaa
acaaccctggcccagcgccgcctggcctacaaagaaaaacatcagcaattcagcgatgtg
aaggctatttgtgagctggaagcgcgcattgtcgggctggaggaagagcgcgctcgcctg
cagcccggagccccttgtccgctctgtggttccagcgaacacccggccgtcgcacaatac
cgggcgctggagcccggcgtgaatcaggcccgccgggatagtctggagcgtgaagtcaaa
cagctggcggaagaaggcgcccagctgcgcggccagcttgaggcactgcttaaacaacag
gttaaagagaaagaagagctggactctctccttcagcaggagcaagcgctcacctcacaa
tggcagacaaccgtcagcggactccattgcgacctgcagccgcaggatgatattcccggc
tggctggcggcccagcaagagagcgaacagcagctgtatcagcaccagcagcgactggcc
tggcaggcccggcagcaggcgggcgagcaacagctcaggcagctccagcaggagcaggaa
caacggcgcgcgcagctggagacagaactctcgcccttcgcgctcagcgttccgcaggcc
gatcggacggcggagtggctggcgcagcgggaagccgagagccgcctgtggcaggaacaa
cagaaccaatccgtcgcgcttcaggagcagcttcaacagctgacgccgctgctggaaaca
cttccaccgacagagccggagccccttccgtcaacggacgagatagccgatccggcgccg
ctgacgggctggcgtcaggtgcatgacgactgcctggcattgcaaagccagtggcggacg
ctgagccagcaggagagccagcagcaggaagcgctgcgggagacgcaaacccgcttcgct
gccgccctctccagcagcccgtttgccgaccagcaggcctttctcgccgctctgctcgac
gaagagacgcgccagcggctggagcggcttaaacaggcgctggaaaatgccgtacagcaa
aataacgctctggcgctgcgcgctcgcgacgcgctcgcccgacatcagcagcaaccgccg
acagacgtcgacctcaccctaccgctggaacaggtccaggtccgtctgctccagctggcg
ccgcagctgcgggaaaacagcgcccgccagggagagatccgccaacagctgaaacagaat
gccggaaaccagcaacgccagcaggcattgcatcaggagatcgcgcttgccgggcagcag
ctcgaggactgggcatggcttaatgcgctaatcggttctaaagagggcgataagttccgc
aaattcgcccaggggctaacgctggataacctggtctggctggcgaaccatcagctcaat
cgcctgcacggacgctaccagctccagcgcaaggccagcgaagcactggagctggaggtg
gttgatacctggcaggcggatgcggtacgcgatacgcggaccctctccggcggtgaaagt
ttccttgtcagcctggcgctggcgctggcgctgtccgatctggtgagtcacaaaacgcgc
atcgattcgctgttccttgatgaagggttcggcacgctcgatagcgaaacgctcgatacc
gcgctggatgcgctcgacgccctgaatgccagcggtaaggtgatcggcgtaataagccac
gttgaagcaatgaaagagcgcattccggtgcagatcaaagttaagaaaatcaacggtctt
ggctacagccggttggataaaatgttttccatcgagtaa
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