Raoultella sp. X13: DSD31_21035
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Entry
DSD31_21035 CDS
T05540
Name
(GenBank) bifunctional glycosyl transferase/transpeptidase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
rao
Raoultella sp. X13
Pathway
rao00550
Peptidoglycan biosynthesis
rao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSD31_21035
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rao01003
]
DSD31_21035
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rao01011
]
DSD31_21035
Enzymes [BR:
rao01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
DSD31_21035
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DSD31_21035
Glycosyltransferases [BR:
rao01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
DSD31_21035
Peptidoglycan biosynthesis and degradation proteins [BR:
rao01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
DSD31_21035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PBP1_TM
UB2H
Transpeptidase
UvrB_inter
FtsA_C
Motif
Other DBs
NCBI-ProteinID:
AXC31777
LinkDB
All DBs
Position
complement(4414989..4417547)
Genome browser
AA seq
852 aa
AA seq
DB search
MAGDDREPIGRKGKPSRPAKQKVTRRRVRDEDYDDDYDDDDYEDQEPMPKKAKGKGNKPR
RKRTWLWLLFKLGIVVAVLVAAYGVYLDQKIRSRIDGKVWELPAAVYGRMVNLEPDMQIS
KNEMVRLLNATQYRQVSAMTRPGEYTVQANSIEMIRRPFDFPDSKEGQVRARLTFDGDHL
ETIENMENNRQFGFFRLDPRLITMLQSANGEQRLFVKRSGFPDLLVDTLLATEDRHFYEH
DGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIVDAR
YSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIY
NPWRNPKLALERRNLVLRLLQQQNVIDQELYDMLSARPLGVQPRGGVISPQPAFMQMVRQ
ELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAATDGIPALKKQRKLPDLETAMVVVDRF
TGEVRAMVGGAEPQFAGYNRAMQARRSIGSLAKPATYLTALSLPNQYRLNTSIADAPISI
RLPNGQTWSPQNDDRRFSGQVMLVDALTRSMNVPTVNLGMALGLPAITDTWVKLGVPKDQ
LHPVPAMILGALNLTPIEVAQAFQTIASGGNRATLSALRSVIAEDGTVLYQSYPQAERAV
PAQAAYMTLWTMQQVVQRGTGRQLGAKYPGLHLAGKTGTTNNNVDTWFAGIDGGQVTITW
VGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLVLTAPEDVVDMGVDSNGNFVCSGGMRS
LPVWTTTPDALCRQGEQMQQQQLEQQQQNNPFNQSGQQQPAQQQQQQQQQQPAKQEKSDG
VAGWIKDMFGGN
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagatgaccgcgagcctatcggacgtaagggaaagccctcgcgtccggcaaaa
caaaaagtgactcgtcgtcgggtccgggatgaggactacgacgatgattacgacgatgat
gattatgaggatcaagagccgatgccgaagaaagcaaaaggcaaaggtaacaagcctcgc
cgtaaacgtacctggctatggctactgttcaagctagggatcgtggtcgcggtgctggtt
gccgcttacggtgtctatctcgatcagaaaatccgtagccgtatcgacggcaaagtctgg
gagcttccggcggcggtctatggccggatggttaacctcgaaccggatatgcagatcagc
aaaaatgagatggtgcgtctgctgaatgccacgcagtaccgccaggtcagcgcgatgacg
cgtccgggcgagtacaccgtgcaggccaacagcattgagatgatccgtcgtccgtttgat
ttccctgatagtaaagaagggcaggtgcgtgcacgtctgacctttgacggcgatcatctg
gaaacgattgagaatatggagaacaaccgccagttcggcttcttccgtctcgatccgcgg
ctgatcacgatgctgcagtcggcaaatggcgaacagcgtctgtttgtcaagcgcagcggt
ttcccggacctgctggtggatacgctgctggcgaccgaagaccgtcacttctatgaacac
gacgggatcagcctgtactcgattggtcgtgcggtgctggcgaacctgacggccgggcgc
acggtgcaaggggccagtacgctgacccagcagctggtgaaaaacctgttcctttccagc
gagcgttcttactggcgtaaagcgaacgaagcctatatggcgctgatcgttgatgcgcgt
tacagcaaggatcgtatccttgagctgtatatgaacgaggtatacctcggtcagagcggc
gacaacgaaattcgcggcttcccgctggcgagcctctattactttggccgcccggtcgaa
gaactcagcctcgaccagcaggcgctgctggtcgggatggtgaaaggggcatcgatttac
aacccgtggcgtaatccgaagctggcgctggaacgacgcaacctggtgctgcgtctgctg
cagcagcagaacgtgatcgatcaggagctgtatgacatgctgagcgcgcgtccgctgggc
gtgcagccgcgcggcggcgtgatctctccacagccggcatttatgcagatggttcgtcag
gagctgcaggcgaaactgggcgataaggtgaaagatctctccggcgtgaagatctttact
acctttgactccgttgcgcaggatgcggcagaaaaagcggcgaccgacggcattccggcc
ttgaagaaacagcgtaagctgccggatctggaaaccgcgatggtggtcgttgaccgcttt
acgggcgaagtgcgggcgatggtcggcggtgcggaaccgcagtttgccggttacaaccgc
gcgatgcaggcccgccgttcaatcggttctctggcgaagccagcgacctatctgacggcg
ctgagcttgccgaaccagtatcgcctgaacacctcgattgccgatgcaccgatctccatc
cgtctgccaaacggtcagacctggtccccgcagaacgacgatcgtcgctttagtggtcag
gtgatgctggtggatgcgttgacgcgctcgatgaacgtgccgaccgttaacctcgggatg
gcgctgggcctgccggcgataaccgacacctgggtcaaactgggcgtgccgaaagatcag
ctgcacccggtaccggcgatgattctcggggcgttgaacctgacgccgatcgaagtcgcg
caggcgttccagaccatcgccagcggcggtaaccgcgcgacgctttcggcgctgcgttcg
gtcatcgccgaagatggtaccgtgctgtatcagagctatccgcaggcagagcgtgcggtg
ccggcgcaggcggcgtacatgacgctgtggaccatgcagcaggttgtgcagcgcggtacc
ggccgtcagcttggcgcgaagtatccgggcctgcatctggcagggaaaaccgggaccacc
aacaataacgtcgatacctggtttgccggtattgacggcggtcaggtgaccattacctgg
gtgggtcgcgataacaaccagccgacgaaactctatggtgccagcggcgccatgtctatt
taccagcgctatctggctaaccagacgccgacgccgctggtgttgacggcaccggaagac
gtggtggatatgggcgtggacagcaatggcaacttcgtgtgtagcggggggatgcgttcg
cttccggtctggacaaccacgccggatgcgctgtgtcgccagggcgagcagatgcaacag
cagcagctggagcagcagcagcagaacaatccgttcaatcagtccggacagcagcagccg
gcgcaacaacagcagcaacagcaacagcaacagcccgcgaagcaggaaaagagcgatggc
gtagcaggctggattaaggatatgttcggcggtaactga
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