Raoultella sp. X13: DSD31_22460
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Entry
DSD31_22460 CDS
T05540
Symbol
dagR
Name
(GenBank) transcriptional regulator DagR
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
rao
Raoultella sp. X13
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rao03000
]
DSD31_22460 (dagR)
Transcription factors [BR:
rao03000
]
Prokaryotic type
Helix-turn-helix
Other families
DSD31_22460 (dagR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
AAA_5
Sigma54_activ_2
AAA_22
AAA
AAA_16
AAA_14
NACHT
Mg_chelatase
AAA_2
HTH_Crp_2
TrmB
nSTAND3
RNA_helicase
IstB_IS21
AAA_7
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AXC32823
LinkDB
All DBs
Position
4708322..4711129
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AA seq
935 aa
AA seq
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MRRIEVVLRELERLTKTISRDDLAAGAGAGAFTAEQIGFNLGLARNSVSKDLNQLWSDGL
VIKTRGRPVFFLHLQATQTLLDRPLAESEREIGAISDLLPDRDQPSVSDPFSLLIGHDRS
LRDAVEKGKAAVLYPHGLHVLLTGPSGVGKTFFAELMHRYACEHSDDSPPPLVYFNCAEY
ANNPELLSSHLFGHRQGAFTGATESKTGLIEQADGGYLLLDEVHRLPYEGQEKLFSLLDK
GEYRPLGASGPARSITVRLICATTEPVNSSLLRTFQRRIQVAIDLPGIRQRSLEEQIELI
IGFLQRESRKIERSVSIDKTLLLWLLNKPLEGNIGQLKSDIQFLCAQAWASGMAAQHDVL
LLDGKLADGSTNPTQEQRMLVDALFNGKTLLSIDARTLPQLKSPAGGDGGIEESDLFYSF
LTREYVNLRNSNVPPAETLAILKNKLSSIFEYGLYSRDSGTRSPRYGDQIEERVALLISY
VEQILGFSLPENLVNPLRKHLLALIGYVQRGLIPQLYSSSLILDRCKDEYENATQLCRKI
NDLLNIQCPATEVVWLCLFLKECRHYRQRIGVSPDCGVILIAHGATTATSMAQYVNRVLE
RELFSAIDMPFEQSVHDTLDALIRLMQARRWQRLILIVDIGSLVHFGSTISKLFQIDVLL
LPDITLTSLLEIGLDLSYETSDLPRLAALMQEKGIPSQLCTPQQENVGKVLVISCITGMG
TAEKIKTVLEESFGELMSQDTRMVILDYNEVRSPERVQQAINAHERLAGIVGTFQPGLPD
IPFISLEELFSEQGPELVLSLLTPDLSSAERRLEMERSASRFISALTMESIINHISVLNP
QRILKEMEGVLSQLRATLAVAPSRQVTLRFLIHCCCMVERIVINRKPLQMALEMKPDMDT
HAFSVIKSAFHPVEEAYAIRLSDAEYIYIYELLYS
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtattgaggtagtactgcgtgaactggagcggctgacgaagaccatcagccgg
gacgacctggccgctggcgctggcgctggcgccttcaccgcagagcaaatcggttttaac
ctcggcctggcgcgcaactccgtcagcaaggatttaaaccagctgtggagcgacgggctg
gttatcaaaacccgcggacgcccggtattctttctgcatctgcaggcgactcaaaccctg
ctggatcggccgctggctgaatcggagcgcgaaatcggcgccattagcgacctgctgcct
gatcgggatcagccatcggttagcgatccgttctcgctgctaatcggccacgatcgcagc
ctgcgggatgcggtggaaaaaggtaaagcggcggtgctctatccgcatgggctgcacgtg
ctgctgaccggcccctccggcgtcgggaagacttttttcgccgagctgatgcaccgctac
gcctgcgaacatagcgacgatagccctccgccgctcgtgtactttaactgcgccgagtac
gccaacaacccggagctgctctcctcccatctctttggccatcgacagggggcgtttacc
ggcgcaacggagagcaagaccggcctgattgaacaggccgacggcggctatctgctactc
gacgaagtccatcgcctgccctatgaaggtcaggaaaaactcttctcgctgctggataaa
ggcgagtatcgcccgctgggcgccagcggcccggcgcgaagcatcaccgttcgccttatc
tgcgccaccaccgagccggtgaactcgtcgctgctgcggacttttcaacgccgcattcag
gtcgccatcgatctccccggcatccgccagcgctcgctggaggagcagatcgaactgatt
atcggcttcctgcagcgggagagccgcaagattgagcgctcggtaagcatcgataaaacg
ctgctgctgtggctgctgaataagccgctggaaggcaatatcggtcagctaaaaagcgat
atccagtttttatgcgcccaggcctgggcgtcagggatggcggcgcagcacgatgtcctg
ctgctggatggcaagctggcggacggttccactaaccccacccaggagcagcggatgctg
gtcgacgcgctgttcaatggtaaaaccctgctcagtattgacgcccgcacgctgccccag
cttaaaagcccggcgggcggcgatggcggcatcgaagagagcgatctgttctatagcttc
ctgacccgcgaatacgtcaatctgcgcaacagtaacgttccgcccgcagagacgctggcc
attctcaaaaacaagctcagctccattttcgaatatggcctctacagccgcgacagcggt
acgcgatcaccgcgctatggcgaccagattgaagagcgcgtcgccctgctgattagctat
gtcgagcagatcctgggcttttccctgccggaaaacctggtcaatccgctgcgcaagcac
ctgctggcgttgatcggctacgtccagcgggggctgatcccgcagctctactcctccagt
ttaattctcgatcgctgtaaagatgaatatgagaacgccacccagctatgcaggaaaatc
aacgacctgctgaatattcagtgcccggcgacggaggtggtctggctgtgcctgttcctc
aaagagtgccgccattaccgccagcggataggcgtcagccccgactgcggagtgatactg
atcgcccacggcgccaccaccgccaccagcatggcgcagtacgtcaatcgggtgctggag
cgcgaactgttcagcgccatcgatatgccgttcgaacagtcggtgcacgacaccctggat
gcgttaatccggctgatgcaggcgcggcgctggcagcggctgatcctgatcgtcgatatc
ggctcgctggtgcatttcggcagcaccatcagcaaactgttccagatagacgtcctgctg
ctgccggatatcaccctgaccagcctgctggagattggcctcgatctaagctacgagacc
agcgacctgccgcggctggcggcgcttatgcaggaaaaaggcatccccagccagctatgc
accccgcagcaggaaaacgtcggcaaggtgctggtcatctcctgcattaccggcatgggc
acggcggagaaaatcaaaaccgtgctggaggagagcttcggcgagctaatgtcgcaggat
acccgcatggtgatcctcgactataacgaagtgcgcagcccggagcgcgtgcagcaggcc
attaacgcccacgagcggctggcggggattgtcgggaccttccagcccggactgccggat
attccgtttatctcgctggaagagctgttttccgagcagggtccggagctggtgttaagc
ctgctgactcccgatctctccagcgccgagcggcggctggagatggagcgcagcgcgtcc
cggtttatcagcgcgctgacgatggaaagcatcatcaaccatatttcggtgctcaacccg
cagcgcatcctcaaagagatggaaggcgtcctcagccagctgcgcgcgaccctggctgtc
gcccccagccgccaggtgacactacgcttcctgatccattgctgctgtatggtcgagcgt
atcgtgattaaccgcaaaccgttacagatggcgctggaaatgaagcccgatatggatact
cacgcctttagtgtcattaaatccgcctttcacccggtggaggaggcctacgccatccgc
ttatcggatgcggaatatatttatatctacgaattattgtatagctga
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