Raoultella sp. X13: DSD31_23600
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Entry
DSD31_23600 CDS
T05540
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rao
Raoultella sp. X13
Pathway
rao03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DSD31_23600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rao03019
]
DSD31_23600
03009 Ribosome biogenesis [BR:
rao03009
]
DSD31_23600
Messenger RNA biogenesis [BR:
rao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSD31_23600
Ribosome biogenesis [BR:
rao03009
]
Eukaryotic type
Pre-60S particles
RNases
DSD31_23600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RE_XamI
Motif
Other DBs
NCBI-ProteinID:
AXC32250
LinkDB
All DBs
Position
complement(4955352..4955897)
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AA seq
181 aa
AA seq
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MSADENNLIWIDLEMTGLDPERDRIIEIATLVTDAHLNILAEGPTIAVHQSDAQLALMDE
WNVRTHTGSGLVERVKASTLGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILDGFKKQGTHQAMDDIRESVAELAYYRENFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagatgaaaacaacctgatttggatcgatctcgaaatgaccgggctggatcct
gagcgcgatcgcattattgaaatcgccactctggtgaccgatgcgcacctgaatattctg
gcggaagggccgacgattgcggttcaccagtccgatgcgcagctggcgctgatggatgag
tggaacgtgcgcacccataccgggagcgggctggtcgaacgcgttaaggccagcaccctg
ggcgatcgcgaagcggaactggccaccctcgaatttcttaaacagtgggtgccggcgggc
aaatcaccgatctgcggcaacagcattggtcaggatcgccgtttcctgttcaaatatatg
cctgagctggaagcttatttccactaccgctacctcgacgtcagcacgctgaaagagctg
gcgcgccgatggaagccggaaatccttgatggttttaaaaagcagggtacccatcaggcg
atggatgatattcgcgagtcggtagcggaactggcttactatcgcgagaactttatcaag
ctgtaa
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