Raoultella sp. X13: DSD31_24485
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Entry
DSD31_24485 CDS
T05540
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rao
Raoultella sp. X13
Pathway
rao00730
Thiamine metabolism
rao01100
Metabolic pathways
rao01240
Biosynthesis of cofactors
Module
rao_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DSD31_24485
Enzymes [BR:
rao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
DSD31_24485
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AXC32403
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All DBs
Position
5131551..5133446
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AA seq
631 aa
AA seq
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MSTEKLTRRQQRERAQRFIDTLEGSAFPNSQRIYIQGSQDDIRVPMREIQLSPTLIGGGK
ENPRYEDNEAIPVYDTSGPYGDPNIPIDVHQGLAKLRQPWIDARNDSEPLSHRSSAYSQQ
RLADDGLDGLRFSRLLTPKRARAGRRVTQLHYARRGLVTPEMEFIALRENMGRERIRSAV
LRHQHPGEGFGAHLPDNITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI
GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL
EKVNGIAEDLSWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPLTARRLTGIVSRGGSIMA
KWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELRTLGELT
KIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGI
GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM
SKARFEFRWEDQFNLALDPFTARAWHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDY
AARQDIESGMADMSQNFRARGGEIYLRKEQA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaaaaactgacccgccgacagcagcgcgaacgcgctcagcgttttatcgac
acgcttgaaggctcggccttccccaactcgcagcgtatctacattcagggttcgcaggat
gatattcgcgtcccgatgcgtgaaatccagcttagccccacgcttatcggcggcggcaaa
gaaaatccgcgctatgaagataacgaagcgatcccggtgtacgatacctccggtccctac
ggcgaccccaatatcccgatcgatgtccaccagggtctggcaaagctgcgccagccgtgg
attgacgcgcgtaacgatagcgaaccgctgagccatcgcagctccgcttactcccagcaa
cgcctggctgatgacggccttgacgggctgcgcttcagccgcctgctgacgccaaagcgg
gccagagccggccgccgcgtgactcagctccactacgcccgccggggcctcgtcacgccg
gagatggagtttatcgccctccgcgaaaatatgggccgcgagcgcattcgtagcgcagtg
ctgcgccaccagcacccgggagaagggttcggcgcccatctgccggacaacatcacgccg
gagtttgtccgcgacgaagtggctgccgggcgcgccattattcccgccaatattaaccat
cccgagtcggagccgatgatcatcggccgtaattttctggtcaaagttaacgccaatatc
ggcaactccgccgtcacctcgtccattgaggaggaggtcgaaaagctggtgtggtcaacc
cgctggggagcggatacggtgatggatctctccaccggccgctatatccacgaaacccgc
gagtggatcctgcgcaacagtccggtgcctatcggtacggtgccgatctatcaggcgctg
gaaaaggtcaacggcattgccgaagacctgagctgggaagcctttcgcgacaccctgctg
gaacaggcggagcaaggcgttgactacttcaccatccacgccggcgtcctgctgcgctac
gtgccgctgaccgccagacgcctcaccggtattgtctcccgcggcggttcgatcatggcg
aaatggtgcctgtcgcaccatcaggaaaacttcctctatcagcacttccgcgaaatttgt
gaaatctgcgccgcctatgacgtttcgctttcgctcggcgacggtctgcgcccgggttcg
atccaggacgccaacgatgaagcgcagtttgccgagctgcgaaccttaggcgagctgacg
aaaatcgcctgggagtacgacgtgcaggtgatgattgaaggtccgggtcacgtgccgatg
cagatgatccgccgcaacatgaccgaagagctggagcactgtcacgaagcgccgttctat
accctcgggccgttaaccaccgatatcgctcccggctacgatcacttcacctccggtatc
ggcgccgcgatgatcggctggtttggctgcgcgatgctctgctacgtcacgccgaaagag
cacctcgggctgccgaataaagaggacgtgaagcaggggctgattacctacaaaatcgcc
gcccacgccgccgacctcgccaaaggccatcccggggcgcagatccgcgataacgccatg
tccaaagcgcgttttgagttccgctgggaggatcagttcaacctcgccctcgacccgttc
accgcccgcgcctggcacgatgaaaccctgccgcaggagtcgggaaaagtcgcccacttc
tgctccatgtgcggacccaaattctgttcaatgaaaatcagccaggaagtgcgcgactac
gccgcccgccaggatatcgaaagcggaatggccgatatgtcgcagaacttccgcgctcgc
ggcggcgaaatctatttacgtaaggagcaagcctga
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