Raoultella sp. X13: DSD31_24675
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Entry
DSD31_24675 CDS
T05540
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
rao
Raoultella sp. X13
Pathway
rao00071
Fatty acid degradation
rao00280
Valine, leucine and isoleucine degradation
rao00310
Lysine degradation
rao00362
Benzoate degradation
rao00380
Tryptophan metabolism
rao00410
beta-Alanine metabolism
rao00640
Propanoate metabolism
rao00650
Butanoate metabolism
rao00907
Pinene, camphor and geraniol degradation
rao00930
Caprolactam degradation
rao01100
Metabolic pathways
rao01110
Biosynthesis of secondary metabolites
rao01120
Microbial metabolism in diverse environments
rao01200
Carbon metabolism
rao01212
Fatty acid metabolism
Module
rao_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DSD31_24675 (fadB)
00650 Butanoate metabolism
DSD31_24675 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
DSD31_24675 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DSD31_24675 (fadB)
00310 Lysine degradation
DSD31_24675 (fadB)
00380 Tryptophan metabolism
DSD31_24675 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DSD31_24675 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
DSD31_24675 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DSD31_24675 (fadB)
00930 Caprolactam degradation
DSD31_24675 (fadB)
Enzymes [BR:
rao01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DSD31_24675 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
DSD31_24675 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
DSD31_24675 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
DSD31_24675 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AXC32429
LinkDB
All DBs
Position
5169035..5171224
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDNLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEALDVLEKQHDLKGLLLRSG
KAAFIVGADITEFLSLFLVPQEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRLLGADSALEIIAAGKDVSADQALK
IGLVDGIVKPEKLRDGALAILRQAINGDLDWKAKRQPKLEPLKLSKIEAAMSFTIAKGMV
AQTAGKHYPAPITAVKTIEAAARFGREEALNLENQSFVPLAHTKEARALVGIFLNDQYVK
AKAKKLTKNVETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLTLGMNEAAKLL
NKQLERGKIDGLKLAGVIGTIHPTLDYAGFERVDVVVEAVVENPKVKKAVLAETEEKVRP
DTVLASNTSTIPIGELASVLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDDTIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKLFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDASRFGQKNGLGFWRYKEDSKGKP
KKEEDPAVDALLAEVSQPKHDFSDDEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPA
RPAGVLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctacaaaggcgacaacctgtacctcgactggctggaagatggcattgccgaactg
gtgttcgatgctcccggctcggtgaacaagctcgataccgcaaccgtagccagcctcggt
gaggcgctggacgtactcgaaaaacaacacgatcttaaggggctgttgctgcgctccggg
aaagcggccttcattgtcggcgctgacatcaccgaatttctgtccctgttcctggtacca
caggagcagttgagccagtggctccattttgccaacagcgtctttaaccgcctggaagat
ttaccggtaccgactatttctgcggtgaacggctatgcgctgggcggcggctgcgagtgc
gtgctggcgacggactaccgtctggctacgccggatctgcgtatcggcctgccggaaacc
aaactgggtatcatgccgggctttggcggctcagtacgaatgccgcgtctgctcggcgcc
gatagcgcgctggaaattattgccgccgggaaagatgtcagtgccgatcaggcgctgaaa
atcggcctcgtcgacggtatcgttaaaccagagaaactgcgcgatggcgcactcgccatt
ctgcgtcaggccattaacggcgacctggactggaaagcgaagcgccagccgaagctggag
ccattgaagctcagtaaaattgaagcggccatgagcttcactatcgccaaaggcatggtg
gcgcagaccgccgggaaacactatccggcgccgataacagcggtaaaaaccatcgaagcg
gccgctcgtttcggccgcgaagaggcgctgaatctggaaaaccaaagttttgtcccgctg
gcgcacaccaaagaggcccgcgcactggtcggtatcttccttaacgatcagtatgtcaaa
gccaaagcgaagaagctgaccaaaaacgttgagacgccgaaacaggccgccgtgctgggg
gccgggatcatgggtggcggtatcgcgtatcagtccgcctggaaaggcgtaccggtgatc
atgaaggacattaacgacaaatcgctgacgctcggcatgaacgaagccgctaagctgctc
aacaagcagcttgagcgcggcaaaatcgatgggctgaagctggccggcgttattggcacg
attcacccgaccctcgattatgctggttttgagcgcgtagatgtcgtggtcgaagccgtc
gtcgagaatccgaaagtgaaaaaggccgtgctggcggaaaccgaagagaaagtccgcccg
gatacggttctggcttctaacacttcaacgattccaatcggtgagctggccagcgtcctg
aaacgtccggaaaacttctgcggtatgcacttctttaacccggtgcatcgcatgccgctg
gtagaagtgattcgcggggaaaaaacctcagatgacaccatcgcaaaagtcgtggcctgg
gcgagcaaaatgggcaaaacgccgatcgtggttaacgattgccccggcttcttcgtcaac
cgcgtgctgttcccctactttgcgggattcagccaactacttcgcgacggcgcggacttc
cgcaaagtcgataaggtgatggagaaactgttcggctggccaatgggcccggcatacctg
ctcgacgtggtcggcatcgacaccgcacaccacgcgcaggcggtgatggccgccggcttc
ccgcagcgcatgcagaaagattatcgcgacgcgatcgacgcgctgttcgacgccagccgt
ttcggccagaaaaacggtctcggcttctggcggtataaagaagacagtaaaggcaaaccg
aagaaagaagaagacccggccgtcgacgccctgctggcggaagtcagtcagccaaaacat
gacttcagcgacgatgagattatcgcccggatgatgattccgatggtcaacgaagtggtc
cgctgcctggaggaaggcattatcgccagcccggcggaagcggatatggcgctggtttat
ggtctcggcttccctccgttccacggcggcgcattccgctggctggataccctgggcagc
gcaaaatatctcgatatggcgcagcagtaccagcacctcggtccgctgtatgaagtgccg
gaaggactgcgtaataaagcacgccataacgaaccctattatcccccggtagaaccagcc
cgcccggcgggcgttctgaaaacggcttaa
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