Klebsiella sp. X13: DSD31_24820
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Entry
DSD31_24820 CDS
T05540
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rao
Klebsiella sp. X13
Pathway
rao03420
Nucleotide excision repair
rao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSD31_24820
03430 Mismatch repair
DSD31_24820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rao03400
]
DSD31_24820
Enzymes [BR:
rao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSD31_24820
DNA repair and recombination proteins [BR:
rao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSD31_24820
MMR (mismatch excision repair)
Other MMR factors
DSD31_24820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXC32458
LinkDB
All DBs
Position
complement(5199936..5202098)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDS
GKVMIVGDDDQSIYGWRGAQVENIQRFLTDFPGAQTIRLEQNYRSTSNILSAANALIENN
SGRLGKKLWTDGADGEPISLYCAFNDLDEARFVVNRIKTWQENGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLKDKVLAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVINDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNDEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEACVEEVRLRATVSRPVSHQRMG
TPMAENDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagcctcaatgataaacagcgtgaagccgtagccgct
tcacgcaccaatatgctggttctggcgggagcgggcagcggtaagacgcgggttctggta
caccgtattgcctggctgctgagcgtggaaaactgctcaccgtattcgattatggcggtg
acctttaccaacaaagcggcagcggagatgcgccatcgtattggccagctgatggggaca
acccagggcggcatgtgggtcgggacattccacgggctggcgcatcgcctgctgcgggcc
caccatctggacgctaacctgccgcaagattttcagatcctcgatagcgaagaccagctg
cgtctgctgaagcgtctgattaaggcgatgaacctcgacgagaagcagtggccgccgcgt
caggcgatgtggtacatcaatagccagaaagatgaagggctgcgcccgcatcatattcag
agctacggcaacccggtggaacagacctggcagaaagtttatcaggcctatcaggaggcc
tgcgatcgcgctggtctggtggactttgctgaactgctgctgcgcgcgcacgagctgtgg
ctcaataaaccgcatattctccagcactaccgcgaacgcttcaccaacatcctcgtggat
gagtttcaggataccaacaacatccagtatgcctggattcgcctgctggcgggcgatagc
ggcaaggtgatgattgtgggggatgatgaccagtcgatctacggctggcgcggcgcccag
gtggagaatattcagcgctttctcaccgatttccccggcgcgcagaccatccgcctggag
cagaactaccgctcgaccagcaatatcctgagcgccgctaacgccctgattgaaaacaac
agcgggcgtctgggcaaaaagctgtggaccgacggggccgacggtgagcctatctccctc
tattgcgcgtttaacgatcttgatgaagcgcgctttgtcgtcaaccgcatcaaaacctgg
caggagaacggcggggcgcttgagcagtgcgccattctctaccgcagtaacgcccagtcg
cgcgtgctggaagaggcgctgctgcaggccagcatgccgtaccgtatctatggcggcatg
cgcttcttcgaacgccaggagatcaaagatgcgctctcctatctgcgcctgatcgccaac
cgtaacgacgatgcggcgtttgagcgggtggtgaatacgcccactcgcggtatcggcgac
cgcacgctggacgtggtgcgccagacctcgcgcgaccgtcagctcacgctgtggcaggct
tgccgcgagctgttaaaagataaagtcctcgccgggcgcgccgccagcgcgctgcaacgc
tttatggagctgattgacgccctggcgcaggagacggcggatatgccgctgcatgtgcag
accgaccgggtgattaacgactccggcctgcggacgatgtacgagcaggaaaagggcgaa
aaaggccagacgcggatagaaaacttagaagagctggtgacggcaacgcgccagttcagc
tacaacgatgaagatgaggatttaatgccgctgcaggccttcctttctcacgccgcgctg
gaagcgggtgaagggcaggcggatacctggcaggatgcggtgcagctgatgacgctgcac
tcggcgaaaggtctggagttcccgcaggtgtttatcgtcggcgtggaagaggggatgttc
ccgagccagatggcgctggatgaaggtggccgactggaagaggagcgtcgtctggcttac
gtcggcgtgacgcgcgcgatgcagaaactgactctcacctatgcggaaacccgccgtctg
tacggcaaagaggtttaccatcgcccgtcgcgctttatcggcgagctgccggaggcctgt
gtggaagaggtacgcctgcgcgcgacggtgagccgtccagtcagccatcagcggatgggg
acgccgatggcggaaaacgatactggctacaaactgggacagcgcgtacgccatccgaag
tttggcgaaggcaccatcgtgaatctggaaggcagcggcgagcatagccgtttgcaggtc
gccttccaggggcaaggtattaaatggttagtggcggcctatgcccggctggaaacagtg
taa
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