KEGG   Rhodovastum atsumiense: RHOA_0117
Entry
RHOA_0117         CDS       T08162                                 
Symbol
nrdZ
Name
(GenBank) Vitamin B12-dependent ribonucleoside-diphosphate reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rap  Rhodovastum atsumiense
Pathway
rap00230  Purine metabolism
rap00240  Pyrimidine metabolism
rap01100  Metabolic pathways
rap01232  Nucleotide metabolism
Module
rap_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
rap_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:rap00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    RHOA_0117 (nrdZ)
   00240 Pyrimidine metabolism
    RHOA_0117 (nrdZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rap03400]
    RHOA_0117 (nrdZ)
Enzymes [BR:rap01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     RHOA_0117 (nrdZ)
DNA repair and recombination proteins [BR:rap03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    RHOA_0117 (nrdZ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN RNR-II_ins_dom
Other DBs
NCBI-ProteinID: CAH2598678
LinkDB
Position
RHOA:123661..125934
AA seq 757 aa
MDIPASALTRVADSLAPISRQIWDAKYRLKTPDGTPLDATVEDSWRRVAHALAAAEQEPQ
LWEERFHGALTDFRFLPAGRILSGAGSDRRVTLFNCFVMGSIEDDLASIFTHLREAALTM
QQGGGIGYDFSTLRPRGAPVRGVGADASGPLSFMDVWDAMCRTIMSAGARRGAMMATLRC
DHPDIEAFIAAKREPGRLRNFNLSVLVTDAFMAAVDRDADWPLVFGGTTYRTVRARELWD
AIARATYDYAEPGVIFIDRINARNNLAYCETIQATNPCGEQPLPPYGACLLGSINLARLV
RSPFTPDARIDGDELADLVGTAVRMLDNTIDVSGFPLEEQRQEALVKRRIGLGITGLANA
LMMVGLRYGSPEAAAQAGHWAEAISHAAYRASCRLAAEKGPFPLFDRDAYLAGETIQALP
ADIRERIAEAGIRNALLTSIAPTGTISLLADNVSSGIEPVFAHSYVRRVREKDGSTREEE
VSDFAVRRYRHAFGAKAALPAHFVTAQDLAPSEHVRMQAAVQRHVDSAISKTVNVPKDIS
FEDFKEVYRDAYRSGCKGCTTYRPNEVTGSVLEVKPAEPSPAPAVSDSTADLLVRADKLS
GATYKLRWPDTDHAFYVTVNDIEHEGIRRPLEVFINSKALEHYAWVVALTRMISAVFRRG
GEVSFVAEELKQVFDPRGGQWANGRYVPSLVAAIGDILERHMVDIGFLTPTGPGRAAAAA
PVAGAAPGTFCPKCSQPGLIKEEGCLSCLHCGWSKCG
NT seq 2274 nt   +upstreamnt  +downstreamnt
atggacatccccgcttctgccctgaccagggtcgcagacagtctcgccccgatctcacgg
cagatctgggatgccaagtaccggctcaagacacccgatggcacgcccctcgacgccact
gtcgaggattcctggcggcgcgtggcacatgccctggccgcggcggagcaagagccgcag
ctctgggaagagcgcttccacggggcgctgaccgatttccgcttcctccccgccgggcgg
atcctctccggggccggcagcgaccggcgcgtgacgctgttcaactgcttcgtgatgggc
agcatcgaggacgacctcgccagcatcttcacccatctgcgcgaagccgcgctgaccatg
cagcaggggggcggcatcggctacgatttctcgaccctgcgcccgcgcggcgcgccggtc
cggggcgtgggcgcggatgcctccggtccgctcagtttcatggatgtctgggacgcgatg
tgccggaccatcatgtccgccggggcccggcgcggcgcgatgatggcgacgctgcgctgc
gaccaccccgacatcgaggccttcatcgccgccaagcgcgaaccggggcggttgcgcaac
ttcaatctctcggtgctggtcaccgacgccttcatggcggcagtggaccgcgacgcggac
tggccgctggtcttcggcggcaccacctaccgcaccgtccgggcgcgcgagctctgggac
gccatcgcccgcgcgacctatgactacgccgagccgggcgtgatcttcatcgaccgcatc
aacgcccgcaacaacctggcctattgcgagaccatccaggctaccaatccgtgtggcgag
cagccgctgccgccctatggcgcctgcctgcttggctcgatcaacctcgcccggctggtg
cgcagccccttcaccccggacgcgcggatcgacggcgacgaactggccgacctggtcggc
acggccgtgcgcatgctcgacaacaccatcgacgtctccggtttcccgctggaggagcag
cgccaggaagccctggtcaagcgccggatcgggcttggcatcaccggcctggccaacgcg
ctgatgatggtggggctgcgctacggctcgccggaagccgcggcacaggccgggcactgg
gccgaggcgatcagccacgccgcctaccgtgcctcctgccgcctggccgccgagaagggg
ccgttccccctgttcgaccgcgacgcctatctcgccggcgaaaccatccaggccctgccg
gccgatatccgcgagcggatcgccgaggcggggatccgcaacgccctgctcacctcgatc
gcgccgaccggcacgatttccctgcttgccgacaatgtctccagcggcatcgagccggtg
ttcgcgcacagctatgtgcgccgcgtgcgcgaaaaggacggcagcacccgcgaggaggaa
gtgtcggacttcgccgtccgccgctaccgccacgccttcggcgccaaggccgcgctgccg
gcacatttcgtcaccgcccaggatctggcgccgtccgagcatgtccgcatgcaggccgcg
gtgcagcgccacgtggacagcgccatctccaagaccgtgaacgtgccgaaggacatcagc
ttcgaggacttcaaggaagtctatcgggatgcctaccggtccggctgcaagggctgcacc
acctaccggccgaacgaggtgaccggatcggttctggaagtgaagccggcggaaccctct
cctgcccccgccgtgagcgattccaccgccgacctgctggtgcgcgccgacaagctgagc
ggcgccacctacaagctgcgctggccggacaccgatcacgccttctacgtgaccgtgaac
gacatcgagcacgaaggtatccgtcgtccgctggaagtcttcatcaattccaaggcgctg
gagcactacgcctgggtggtggcgctgacgcggatgatcagcgcggtgttccgccgcggc
ggagaagtgtccttcgtcgccgaggaactcaagcaggtcttcgacccccgcggcgggcaa
tgggccaatggccgctatgtgccctcgctggtggccgcgatcggtgacatccttgaacgt
cacatggtcgatatcggcttcctgacgccgaccggcccgggacgcgccgccgcggcggca
ccggtggccggcgccgccccgggaacgttctgcccgaaatgcagccagccgggactgatc
aaggaagaaggctgcctgagctgcctgcattgcggctggtcgaaatgcggctga

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