Rhodovastum atsumiense: RHOA_0241
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Entry
RHOA_0241 CDS
T08162
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHOA_0241 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rap03019
]
RHOA_0241 (groL)
03110 Chaperones and folding catalysts [BR:
rap03110
]
RHOA_0241 (groL)
03029 Mitochondrial biogenesis [BR:
rap03029
]
RHOA_0241 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rap04147
]
RHOA_0241 (groL)
Enzymes [BR:
rap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RHOA_0241 (groL)
Messenger RNA biogenesis [BR:
rap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RHOA_0241 (groL)
Chaperones and folding catalysts [BR:
rap03110
]
Heat shock proteins
HSP60 / Chaperonin
RHOA_0241 (groL)
Mitochondrial biogenesis [BR:
rap03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RHOA_0241 (groL)
Exosome [BR:
rap04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RHOA_0241 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RHOA_0241 (groL)
Exosomal proteins of breast cancer cells
RHOA_0241 (groL)
Exosomal proteins of colorectal cancer cells
RHOA_0241 (groL)
Exosomal proteins of bladder cancer cells
RHOA_0241 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CAH2598808
LinkDB
All DBs
Position
RHOA:complement(275207..276838)
Genome browser
AA seq
543 aa
AA seq
DB search
MAAKDVRFGGDARARLLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEV
ELADKFENLGAQLVREVASKTNDLAGDGTTTATVLAQAIVREGAKAVAAGLNPQDLRRGI
DKATATVVEELKKKSKKITSPAETAQVGTISANGEAEIGHIISEAMQKVGNEGVITVEEA
KGIQTELDVVEGMQFDRGYVSPYFVTNAEKLNAELDQPYILIHEKKLSGLQPILPLLESV
VQSGRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAILEDIAILTGGTV
VSEDLGIKLENVTLNQLGRAKRVLIEKENTTIVEGSGKKDDIKGRVNQIRAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGVALA
RASLILSKLKADNDDQRFGIEIVRKAVLSPLRQIAENAGEDGAVISGKVLDKDEYNWGFD
AQTAEFKDLVKAGIIDPTKVVRTALQDAASVAALLVTTEALIAERPEKKAPPAAPPGGGD
LDF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaggatgtgcgtttcggcggggatgcccgcgcccggctgctgcgtggcgtc
gatatcctggccgatgcggtgaaggtcacgctcggccccaagggccgcaacgtcgtgatc
gacaagagcttcggtgcgccgcggatcaccaaggacggcgtgaccgtcgccaaggaagtc
gaactggccgacaagttcgagaacctgggcgcgcagctggtgcgtgaggtggcgtcgaag
accaacgaccttgccggcgacggcaccaccaccgcgaccgtgctggctcaggcgatcgtg
cgcgagggcgccaaggcggttgccgccgggctcaatccgcaggacctgcgccgcggcatc
gacaaggcgaccgccaccgtggtcgaggagctgaagaagaagtcgaagaagatcaccagc
ccggccgagaccgcgcaggtgggcaccatctcggcgaatggcgaggccgagatcggccac
atcatttccgaggcgatgcagaaggtcggcaacgagggcgtgatcacggtcgaggaggcc
aagggcatccagaccgagctcgacgtcgtcgagggcatgcagttcgaccgcggctacgtg
tctccgtatttcgtcaccaatgccgagaagctgaatgccgaactggatcagccctacatc
ctgatccatgagaagaagctctccggcctgcagccgatcctgcccctgctggaaagcgtg
gtgcagtcgggccgtccgctgctgatcatcgccgaggacgtggaaggcgaggcgctggcc
accctggtggtcaacaagctgcgcggcggcctgaaagtcgcggcggtgaaggcgccgggc
ttcggtgatcgccgcaaggccatcctggaagatatcgccatcctgaccggcggcaccgtc
gtctccgaggatctgggcatcaagctcgagaacgtcacgctcaaccagctcggccgggcc
aagcgcgtgctgatcgagaaggaaaacaccacgatcgtcgaaggctccggcaagaaggac
gacatcaagggccgggtgaaccagatccgcgcgcagatcgaggaaaccacctcggactac
gaccgcgagaagctgcaggagcggctggcgaagctcgctggcggcgtggcggtgatccgt
gtcggcggcgccaccgaggtcgaggtgaaggagcgcaaggaccgcgtcgatgacgcgctg
catgcgacccgcgccgcggtcgaggaaggcatcgttccgggtggcggcgtggcgctcgcg
cgggccagcctgatcctgagcaagctgaaggccgacaatgacgaccagcgcttcggcatc
gagatcgtccgcaaggcggtgctctcgccgctgcgccagatcgccgagaacgccggcgag
gacggtgcggtgatctccggcaaggtgctcgacaaggacgagtacaactggggcttcgac
gcgcagaccgccgagttcaaggacctggtgaaggccggcatcatcgacccgaccaaggtc
gtgcgcacggcgctgcaggatgcggcctccgttgccgccctgctggtcaccaccgaggcg
ctgatcgcggagcggccggagaagaaggctccgcccgcggcgcccccgggcggcggcgac
ctcgacttctga
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