Rhodovastum atsumiense: RHOA_0363
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Entry
RHOA_0363 CDS
T08162
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
rap
Rhodovastum atsumiense
Pathway
rap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHOA_0363
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_0363
Transporters [BR:
rap02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RHOA_0363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
CAH2598944
LinkDB
All DBs
Position
RHOA:complement(395142..396053)
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AA seq
303 aa
AA seq
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MRLFAAGRHVQATSDMTSPTATFPVPHSPAASRIADLPDSAARLLGRLLAAVGAVAIFLP
LVLTLYLSVFDETLISFPPRGYTLAWYGRILDEFGAAIWTSLQVAAITVVLALCIGVPAG
IGLSRYRFPGREVLSTLLLAPLTVPGVALGLGLYVFAVWVEMGTGLALSGSFGFLVSAHV
LITLPWVVRLCLAGLVNHDRATEEAAANLGASPLRVIWRVTLPAMRSGIAAAALFAFIVS
FENLDMTIFLVSPGMNTLSNATLQYLAYHIDPLVAAVAVVQMLVISAVLILLDRLVRLGQ
VMR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgttcgcagccggccggcacgtccaggcgacatccgacatgacctctccgacc
gccacgtttcctgtcccgcacagtccggccgcgtcgcggatcgccgacctgccggattcg
gccgcgcgcctgctcgggcgcctgctcgccgcagtgggcgcggtcgcgatcttcctgcca
ctggtgttgacgctttacctcagcgtgttcgacgagacgctgatctccttcccgccgcgc
ggctacacgctggcctggtacggccgcatcctcgacgagttcggcgcggcgatctggacc
agcctgcaggtggccgcgatcaccgtcgtgctggcactctgcatcggcgtgccggcgggg
atcggcctgtcacgctaccgctttccgggacgggaggtgctcagcacgctgctgctggcg
ccgctgacggtgccgggggtggcgctcggcctcgggctctatgtcttcgccgtctgggtg
gagatgggaaccggcctcgcacttagcgggtcctttggttttcttgtcagcgctcatgtg
ctgattaccctgccctgggtggtgcgcctctgcctcgccgggctggtgaaccacgaccgc
gccaccgaggaggccgccgccaatctcggcgcctcgccgctgcgcgtgatctggcgcgtg
acgctgcccgccatgcggtcgggcatcgccgcggcggcactgttcgccttcatcgtctcg
ttcgagaacctggacatgacgatcttcctcgtcagccccggcatgaacacgctctcgaac
gcgacgcttcagtatctggcctatcacatcgacccgctggtggccgcggtggccgtcgtg
cagatgctcgtcatcagcgcggtgctcatcctgctcgaccggctggtgcgtcttggacag
gtgatgcgatga
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