Rhodovastum atsumiense: RHOA_0534
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Entry
RHOA_0534 CDS
T08162
Symbol
lptF
Name
(GenBank) Lipopolysaccharide export system permease protein LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
rap
Rhodovastum atsumiense
Pathway
rap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHOA_0534 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_0534 (lptF)
Transporters [BR:
rap02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
RHOA_0534 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
CAH2599116
LinkDB
All DBs
Position
RHOA:complement(585957..587114)
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AA seq
385 aa
AA seq
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MSVLPIRIGPIVTRLDRYIFRQLLLALVATTAGLVALIWLTQSLRFVELVVNRGLSVRVF
LELSSLQIPYFVSVILPITTFVVVQFIYQRLSGDRELTVMRAAGLSPLALARPALAVALV
AVACGYLLNLVLVPAASQAFRQYQFEIRNRVAAFLLQEGVFTPVSDDLTVYVRARDPDGG
LRGILIEDARQKNNPATILAERGRLVSSEGAPRVLLINGSRQEIDRQTGRLNVLTFAENM
IDLSRSERGEEQRFRDISEMSLGELLHPVAGAVLERDLPKLQVEANRRLASPLTTLTFTL
VALVCVLMGTFRRHGGLVRPLLAVLAVVGLLASSLLLTNLAAKQAAMIPLIWVNAVLPGL
VCAWALFGPQFRLVPVALQLRLGAS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgctgcccatccgaatcggcccgattgtcacccggctcgatcgctatattttc
cgccagttgctgctggccctggtcgccaccaccgccgggctggtggcgctgatctggctg
acgcagtcgctgcgcttcgtcgagctggtggtcaaccgtgggttgtcggttcgggtgttc
ctggaactgtcgagcctgcagattccttattttgtctcggtgatcctgccgatcacgacc
ttcgtcgtggtgcagttcatctaccagaggttgtccggcgaccgggaactgacggtgatg
cgcgcggccgggctgtcgccgctggcgctggcgcggccggcgctcgcggtggcgctggtg
gcggtggcctgcggctacctgctgaacctggtgctggtgccggcggcctcgcaggcgttc
cggcagtatcagttcgagatccgcaaccgcgtggccgccttcctgctgcaggaaggcgtg
ttcaccccggtctccgacgacctgacggtctatgtgcgggcgcgcgaccccgatggcggg
ctgcgtggcatcctgatcgaggacgcccggcagaagaacaatccggccaccatcctggcc
gagcgcgggcggctggtgtcatcggagggcgcgccgcgggtgctgctgatcaacggcagc
cgccaggagatcgaccgccagaccggccggctcaacgtgctgaccttcgccgagaacatg
atcgacctcagccgcagcgagcgcggggaggagcagcgattccgcgacatcagcgagatg
tcgctcggtgaattgctgcatccggtggcgggggcggtactggagcgcgacctgccgaag
ctgcaggtggaggcaaaccggcgcctggcatcaccgctgaccacgctgaccttcaccctg
gtcgcgctggtctgcgtgctgatgggcacgttccgccgccatggcgggctggtgcggccg
ctgctggcggtgctggcggtggtcgggctgctggcatcttccctgctgctgaccaatctc
gccgccaagcaggcggcgatgatcccgctgatctgggtgaatgcggtgctgcccggcctg
gtctgcgcctgggcgctgttcggcccgcagttccggctggtcccggttgccctgcaactg
cggctgggggcgagctga
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