Rhodovastum atsumiense: RHOA_0539
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Entry
RHOA_0539 CDS
T08162
Name
(GenBank) Outer membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_0539
Transporters [BR:
rap02000
]
Other transporters
Pores ion channels [TC:
1
]
RHOA_0539
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Surface_Ag_2
Opacity
Motif
Other DBs
NCBI-ProteinID:
CAH2599121
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All DBs
Position
RHOA:complement(592215..593291)
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AA seq
358 aa
AA seq
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MKLRNALLAASVLALPVVAQAQPINGLYVGGGLGYNYTQDIDTKGTAAIPGGTVSGSGKL
TGNGGLGAVGSVGWGFGNGVRVELEGNYRDNHTRLTKAGRVQGGADLQTYGVMINGLYDF
DLGLPVTPYAGAGIGYEWTQVSSAKAYLPGGPNQISGANKTEGSLATQAILGASYALPVP
GLSLTAEYRFMATVEEPKYKGSVAGVPGTVKLGNQYNHAAMLGVRYAFNSAPAVPPPAPV
PVVAPAPAPSRTYLVFFDWDRADLTARARQIIAEAAQNSTRVQLTQIEVAGHADRTGTAR
YNLGLSRKRAENVAAELVRNGVPRNAIAIQAYGDSRPLVPTAAGVREPQNRRVEIVLR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcggaacgcgctgttggccgcgtccgtgttggccctgccggtggtggcgcag
gcgcagccgatcaacggcctctatgtcggtggtgggctgggctacaactacacgcaggac
atcgacaccaagggaacggcggcgattcccggcggcacggtcagcggctccgggaagctg
acgggcaatggcggtcttggcgcggtcggcagcgttggctggggcttcggcaacggcgtg
cgcgtcgagctcgagggcaattaccgcgacaaccacacgcgcctgaccaaggcgggccgt
gtgcagggcggtgccgatctgcagacctacggcgtgatgatcaacggcctgtatgatttc
gacctcggcctgccggtgacgccgtatgccggcgccggtatcggctatgaatggacgcag
gtcagcagcgcgaaggcgtatctgccgggcgggccgaaccagatcagcggtgcgaacaag
accgaaggcagcctggcgacgcaggcgatcctgggcgcgtcctatgcgctgccggtgccg
ggcctgtcgctgaccgccgagtatcgcttcatggcgacggtcgaggagcccaagtacaag
ggcagcgtggctggcgtgccggggacggtgaagctgggcaaccagtataaccacgcggcg
atgctgggcgtgcgctatgcgttcaactcggctccggcggtgccgccgccggccccggtg
ccggtggttgcccccgcgccggcgccctcgcgcacctacctggtgttcttcgactgggat
cgggctgacctgaccgcgcgcgcgcgccagatcatcgccgaggcggcgcagaactcgacc
cgcgtgcagctgacgcagatcgaggttgccggccacgccgaccgcaccggcaccgcccgc
tacaatctcgggctgtcgcgcaagcgtgccgagaacgtggcggccgagctggtgcgcaac
ggcgtgccgcgcaatgccatcgcgatccaggcctacggcgacagccgcccgctggtgccg
accgccgccggcgtccgcgagccgcagaaccgtcgcgtcgagatcgtgctgcgctaa
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