Rhodovastum atsumiense: RHOA_0541
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Entry
RHOA_0541 CDS
T08162
Name
(GenBank) Outer membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_0541
Transporters [BR:
rap02000
]
Other transporters
Pores ion channels [TC:
1
]
RHOA_0541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
DEC-1_N
Pilus_CpaD
Motif
Other DBs
NCBI-ProteinID:
CAH2599123
LinkDB
All DBs
Position
RHOA:complement(595055..596185)
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AA seq
376 aa
AA seq
DB search
MKLRSVMLAATMLALPVTAWTAEPITGLYIGGGIGFDYLNSVNAKSVSFATPVFGVTRSV
SSNGSLSSSGGFVGLASVGYGLGNGLRFELEGNYRSNHTRTTGTSGIAGGGNILQYGVFV
NGLYDFTEVASWVQPYAGIGFGYIWNEFQSGRLYTTNLNPQSQINFSNSSSGEAAGQVIL
GAAFPLGVPGLALTTEFRFVGQFGEPSFNGSTAIRRGSAVGPASGTSIKIGNPTNESVLV
GLRYAFNAAPPPPPPAPAPVAAPAPAPSRTYLVFFDWDRADLTARARQIIAEAAQNSSRV
QYTRIEVAGHADRTGTANYNIALSRRRAENVAAELVRNGVPREAISIEAFGYSRPLVPTA
PGVREPQNRRVEIVFK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcggagcgtgatgctggccgcgaccatgctggcgttgccggtaacggcgtgg
acggcggagccgatcactggcttgtatatcggtggcggtatcggatttgactacctgaac
tcagtgaatgccaagagcgtctcgttcgccaccccggtcttcggcgtgaccagatccgtc
agcagcaatgggtcgctttcgtcgagtggcggtttcgtcgggcttgccagcgtcggctat
gggctcggcaacggcctgcgcttcgaactggagggcaattaccggtccaatcacacccgg
accaccgggacttcgggcattgccggcggcggcaacatcctgcagtacggcgtcttcgtg
aacgggttgtacgacttcaccgaagtcgcgagctgggtccagccctatgccggcatcggc
ttcggctatatctggaacgaattccagtcgggccggttgtacaccaccaacctgaacccg
cagtcgcagatcaacttcagcaattcttcctctggtgaagcggccgggcaggtgatcctc
ggcgcggccttcccgctcggtgtacccggcctggcgctgacgaccgagttccgtttcgtc
ggccagttcggcgagccgagcttcaacggatcgacggccatccggcgtgggtcggcggtc
ggcccggccagcggcacctcgatcaagatcggcaaccccaccaacgaatccgttctggtc
gggcttcgttatgccttcaatgcggccccgccgccgccgccgcccgcaccggcccccgtt
gccgcaccggcgccggcgccctcgcgcacctacctggtgttcttcgactgggatcgggcc
gacctgaccgcgcgcgcgcgccagatcatcgccgaggcggcgcagaactcgagtcgagtg
caatacacccgtatcgaggttgccggtcacgccgaccgcaccggcaccgccaactacaat
atcgccctgtcgcgccgccgcgccgagaacgtggccgccgagctggtgcgcaacggcgtg
ccgcgcgaagccatctcgatcgaagccttcggctacagccgtccgctggtgccgaccgcc
ccgggcgtgcgggaaccgcagaaccgccgcgtcgagatcgtcttcaagtag
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