Rhodovastum atsumiense: RHOA_0623
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Entry
RHOA_0623 CDS
T08162
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rap03400
]
RHOA_0623 (phrA)
Enzymes [BR:
rap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RHOA_0623 (phrA)
DNA repair and recombination proteins [BR:
rap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RHOA_0623 (phrA)
Prokaryotic type
RHOA_0623 (phrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CAH2599205
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All DBs
Position
RHOA:679644..681062
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AA seq
472 aa
AA seq
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MTSPVLLWLHRELRLGDNRALLAAVASGQPVLPIFVLDDETPGAWRPGEASRWWLHHSLA
ALAADLARLGAPLLLRRGRIADILPSLVRETGASAIHAGQPVEPWARRVAAELPRLAGVP
LVLHRTVTLFDPEALRSGAGTPYAVFTPFSKACLARGPAAPPLPAPAHILAPERVPPSDP
LEAWGLLPGQPDWAGGLRGTWTPGEAGARQRLAGFLDHTMEAYATARDRPDMDGTSRLSP
HLHFGEISADQLWHAARAAGDGPGQIAFIREILWREFSAHLLWHHPTLPETPLRPNFARM
PWQTAPRALRAWQRGRTGLPIVDAGMRQLWQTGWMHNRVRMIVASLLVKHLMLPWQQGEA
WFWDTLVDADLANNAASWQWVAGCGADAAPFFRIFNPVLQGRKFDPDGSYVRRFVPELAR
LPDRWIHEPWAAPADVLEAARLRPGITYPAPIVDLAAGRARALAAFASLSAT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacctctcccgttctcctctggctgcatcgcgaactgcgccttggcgacaaccgcgcc
ctgctcgcggcggtcgccagcgggcagcccgtgctgccgatctttgtcctcgatgacgag
acgcccggggcatggcgccccggcgaggcgtcacgctggtggctgcatcacagcctcgcc
gccctggcggccgatctcgcccggctgggtgcgccactgctgctgcggcgcgggcgcatc
gccgacatcctgccgtccctggtgcgggaaaccggcgccagcgcgatccatgccggccag
ccggtcgagccctgggcacggcgcgtggccgccgaactgccacggctggccggcgtgccg
ctcgtcctgcaccgcaccgtcacgctgttcgacccggaggcgctgcgcagcggcgccggc
acgccctacgcggtcttcacccccttctccaaggcctgccttgcccgggggccggccgcc
ccccctctccccgcgcccgcgcacatcctcgccccggaacgggtcccgccgtccgaccct
ctggaggcatggggcctactcccaggccagccggactgggccggcggcttgcgggggacc
tggacaccgggcgaagccggcgcccggcagcgccttgccggctttctcgaccataccatg
gaagcctatgccaccgcgcgcgaccggccggacatggacggcacctcccggctctcgccg
cacctgcatttcggcgagatcagcgccgaccagctctggcacgccgcccgggccgccggc
gacggccccggccagatcgccttcatccgcgaaatcctgtggcgggaattctccgcccac
ctgctctggcatcatcccaccctgccggagaccccgctccggccgaacttcgcccgcatg
ccctggcagacggccccgcgagcgctccgtgcctggcagcgcggccgcaccggcctgccg
atcgtcgatgccgggatgcgccagctctggcagaccggctggatgcataatcgcgtgcgc
atgatcgtcgccagcctgctggtcaagcacctgatgctgccctggcagcagggcgaggcc
tggttctgggacacgctggtggacgccgatctcgccaacaacgccgcctcctggcagtgg
gtggcgggctgcggcgccgatgccgccccgttcttccggatcttcaacccggtgctgcag
ggccggaagttcgaccccgatggcagctatgtccgccgcttcgtcccggagctggcccgc
ctgcccgatcgctggatccacgagccctgggctgcccccgccgacgtgctggaagccgcc
cggttgcgccccggcatcacctatcccgcgccgatcgtcgacctagccgccgggcgggcc
cgcgcgctggccgccttcgccagcctgtcggccacgtga
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