Rhodovastum atsumiense: RHOA_0731
Help
Entry
RHOA_0731 CDS
T08162
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00260
Glycine, serine and threonine metabolism
rap00460
Cyanoamino acid metabolism
rap00630
Glyoxylate and dicarboxylate metabolism
rap00670
One carbon pool by folate
rap00680
Methane metabolism
rap01100
Metabolic pathways
rap01110
Biosynthesis of secondary metabolites
rap01120
Microbial metabolism in diverse environments
rap01200
Carbon metabolism
rap01230
Biosynthesis of amino acids
rap01240
Biosynthesis of cofactors
rap04981
Folate transport and metabolism
Module
rap_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RHOA_0731 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RHOA_0731 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RHOA_0731 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RHOA_0731 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RHOA_0731 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RHOA_0731 (glyA)
Enzymes [BR:
rap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RHOA_0731 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
CAH2599313
LinkDB
All DBs
Position
RHOA:complement(788169..789458)
Genome browser
AA seq
429 aa
AA seq
DB search
MTDAALQRFFNAPLAETDPELAAAIGRELHRQQDGIELIASENIVSRAVLEAQGSVLTNK
YAEGYPGRRYYGGCVEVDVAEQLAIDRAKRLFGAEFANVQPHSGAQANQTVFLALVQPGD
TILGMSLAAGGHLTHGAAPNLSGKWFRAIQYGVRREDGLIDYDEVERLARTEKPKLIIAG
GSAYPRVIDFARFRRIADEVGAYFMVDMAHFAGLVAAGVHPSPLPHAHVVTTTTHKTLRG
PRGGMVLTNDLELGKKINSALFPGLQGGPLMHVIAAKAAAFGEALTEEFRAYQRAVAANA
KALAATLVDQGLAIVTGGTDTHLMLVDLRPKNVTGKAAEASLDRAHITANKNAIPFDPQK
PAITSGLRLGTPAATTRGFGVAEFQEIGRCIGEVLDGLSKSNDGSNAAAEQAVGERILAL
CKRFPIYTR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccgcgctgcagcgcttcttcaatgccccgctcgccgaaaccgatcccgaa
cttgccgccgccatcggccgcgagctgcaccgccagcaggacggcatcgagctgatcgcc
agcgagaacatcgtctcccgcgccgtactggaagcgcagggctccgtactcaccaataag
tacgcggaaggctatccgggccggcgctactacggcggctgcgtcgaggtggacgtcgcc
gagcagctcgccattgaccgcgcgaaacgcctgttcggcgccgagttcgccaatgtgcag
ccgcattccggcgcgcaggcgaaccagacggtgttcctggccctggtgcagcccggcgac
accatcctgggcatgagcctcgccgccggcgggcacctgacccatggcgccgcgccgaac
ctgtcgggcaagtggttccgcgccatccagtacggcgtgcgccgcgaggacggcctgatc
gactatgacgaggtcgagcgcctcgcccgcaccgagaagccgaagctgatcatcgccggc
ggctccgcctatccgcgggtgatcgacttcgcccgcttccgccgcattgccgacgaggtc
ggtgcctatttcatggtggacatggcgcatttcgccggtctggtggccgccggggtgcac
ccgagcccgctgccgcatgcgcacgtggtcaccaccaccacccacaagaccctgcgcggc
ccgcgcggcggcatggtgctgaccaacgacctggaactcggcaagaagatcaattccgcc
ctgttccccggcctgcagggcggcccgctgatgcacgtgatcgccgccaaggccgccgcc
ttcggcgaggcgctgaccgaggaattccgcgcctaccagcgcgccgtcgcggccaatgcc
aaggcgctggcggcgactctggtggaccaggggctggccatcgtcaccggcggcaccgac
acccacctgatgctggtcgacctgcggcccaagaacgtcaccggcaaggcggcggaggca
agcctcgaccgcgcccacatcaccgccaacaagaacgccatcccgttcgatccgcagaag
ccggcgatcacctccggcctgcgcctcggcacccccgccgccaccacccgcggcttcggc
gtcgccgagttccaggaaatcgggcgctgcatcggcgaggtgctggacgggctgtcgaag
tccaatgacggcagcaacgccgcggccgagcaggcggtgggagagcggatccttgcactc
tgcaagcgattcccgatctacacccggtaa
DBGET
integrated database retrieval system