Rhodovastum atsumiense: RHOA_0887
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Entry
RHOA_0887 CDS
T08162
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00470
D-Amino acid metabolism
rap00550
Peptidoglycan biosynthesis
rap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RHOA_0887 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RHOA_0887 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rap01011
]
RHOA_0887 (murD)
Enzymes [BR:
rap01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RHOA_0887 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rap01011
]
Precursor biosynthesis
Amino acid ligase
RHOA_0887 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
MurD-like_N
KARI_N
CbiA
AlaDh_PNT_C
NAD_binding_2
TrkA_N
AdoHcyase_NAD
Motif
Other DBs
NCBI-ProteinID:
CAH2599483
LinkDB
All DBs
Position
RHOA:954206..955573
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AA seq
455 aa
AA seq
DB search
MTFPSHLFAGRRFAVVGLGRNGLPAARTLRAMGAEVVTWDDKAPARAQAEAEGLAVREPD
MAGLDALVLSPGIPHTLPAPHPLAARARAAGVPILSDADLLYQAVRASGSRARFAGITGT
NGKSTTTALLAHILERTGRPVAAGGNLGTAALALPRLDHDGVYVLEMSSYMLERLAALRF
DIATMLNLSPDHLDRHGDMAGYARAKRSIFDRQTGADTAVVGIDDADGRAMAAALRAGPA
RLMTISGEGPADLGPEGSVLRDADGPIVDLARARALPGSHNAQNAAAAAAMALSLGVTRT
QVAEGILSYPGLPHRQERVAEAAGVVFVNDSKATNADSAARALGCYDRLIWIAGGMAKAG
GIDSLVPFFPRIALALLIGRDAPVLAQTLAAHGVPHRDVGTLDAAVAAAWQEARAGTAPV
VLLSPACASWDQFTGFDARGDRFRALAQALAESSA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcccctcgcacctcttcgcgggacgccgcttcgccgtcgtcgggctgggccgc
aacggcctgcccgcggcgcggacgctgcgggccatgggcgcggaggtggtcacgtgggac
gacaaggcgccggcgcgcgcgcaggccgaggccgaagggctggcggtgcgcgagccggac
atggcggggctggacgcgctggtgctctcgccggggatcccgcacaccctgcccgcgccg
cacccgctggccgcgcgcgcgcgggcggcgggggtgccgatcctgtccgatgccgacctg
ctgtaccaggccgtgcgggccagtggctcgcgcgcccgcttcgctggcatcaccggcacc
aacggcaagtccaccaccaccgccctgctcgcccacatcctggaacggaccggccgcccg
gtggcggcggggggcaatctcggcacggcggcactggccttgccccggctcgatcacgat
ggcgtgtacgtgctcgagatgtcgtcctacatgctggaacgactcgcggcacttcgtttc
gacatcgcgaccatgctcaacctcagcccggaccacctggaccggcatggcgacatggcg
ggctatgcgcgggccaagcggtccatcttcgaccgccagaccggcgccgacacggcggtg
gtgggcatcgacgacgccgacgggcgcgcgatggcggcggcgctgcgcgcggggccggcg
cgcctgatgacgatttccggcgaaggaccggccgatctgggacccgaggggagcgtgctg
cgcgacgccgacgggccgatcgtggatctcgcgcgggcccgcgccctgccgggcagccac
aacgcccagaatgccgccgccgccgcggcgatggcgctttccctcggcgtgacgcggaca
caggtcgccgaaggtattctcagctatccgggcctgccgcaccggcaggaacgcgtggcc
gaggccgccggcgtggtgttcgtcaacgacagcaaggcgaccaatgccgattccgcggcg
cgcgcgctcggttgctacgatcgcctcatctggatcgccggcggcatggccaaggcgggc
ggcatcgacagcctggtgccattcttcccgcgcatcgcgctggcgttgctgatcgggcgc
gacgccccggtgctggcgcagaccctggccgcgcacggcgtgccgcatcgcgatgtcggc
acgctggatgcggcggtggcggcggcctggcaggaagcgcgtgccggcaccgcgccggtg
gtgctgctctcgccggcctgtgcgtcctgggaccagttcaccggcttcgatgcacgcggc
gaccgcttccgcgcgctggcgcaggccctggcggagagcagcgcatga
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