Rhodovastum atsumiense: RHOA_0993
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Entry
RHOA_0993 CDS
T08162
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rap03016
]
RHOA_0993
Enzymes [BR:
rap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
RHOA_0993
Transfer RNA biogenesis [BR:
rap03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
RHOA_0993
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
KR
Motif
Other DBs
NCBI-ProteinID:
CAH2599589
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All DBs
Position
RHOA:1066736..1067269
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AA seq
177 aa
AA seq
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MRLFVGLDFPWDVKQQLAALAGGVPGARWVPVENYHLTLRFIGEVPAHRAEEIDEALAGL
RARSFPMSLAGIGTFAKGGQENALWVGVEKNPQLEALRSKIETALQRAGLEPERRRFSPH
VTLARLRDAAEAKLAGFVQSHNLLRVGPLEVDRFVLFSSRLGKEASVYTPEVEYGLH
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgtttgtcggactcgattttccctgggacgtgaagcagcaacttgcggcattg
gcaggtggcgtgccgggtgcgcgctgggtcccggtggagaactatcatctgaccttgcgc
ttcatcggcgaggtgcccgcgcaccgggccgaggaaatcgacgaggccctggccgggttg
cgggcgcgctcctttcccatgagcctggccggcatcggcaccttcgccaagggcgggcag
gaaaacgcgctctgggtgggggtggagaagaacccccagctcgaagccctgcgcagcaag
atcgagacggccctgcaacgggccggactggaaccggaacggcgccgcttctcgccgcac
gtcaccctggcgcggctgcgcgacgcggcggaggcgaagctcgccggatttgtgcagagc
cacaacctgctgcgggtcggtcccctggaagtggaccgcttcgtgctgttcagctcccgc
ctgggcaaggaagcatccgtctacacgccggaggtggaatatggtctccactga
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