Rhodovastum atsumiense: RHOA_1342
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Entry
RHOA_1342 CDS
T08162
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rap
Rhodovastum atsumiense
Pathway
rap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHOA_1342
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_1342
Transporters [BR:
rap02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHOA_1342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
XylR_N
Motif
Other DBs
NCBI-ProteinID:
CAH2599947
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All DBs
Position
RHOA:complement(1412127..1413713)
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AA seq
528 aa
AA seq
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MLTRRSVLAASAATAFVPSAFAATPKDVLVVGQQLEQLISLDPGETFEVNGGEAVSNCYN
RLLEPDPADPNRLKGDLAETWEVAPDGVTFTFHLRGNAKFATGKPVTAEDAAFSLQRAVK
LNKTPAFILTQFGFARDNVDVRIVAPDPRTLVLTVGAQVAPTLLLYCLTANVASVVEKAE
VLANAQGDDLGNQWLKTHSAGSGPYVLRNWKANETVLYETNPHALVRPKTRRVIVKHIAD
PSAQLLQLQKGDIDIARDLQAEQLRAAEADPSLRLSRALRGSLLYVGMNQAHPALARPEV
RQAIKWAIDYDAIQKNITPFTHRVHQSFLPEGFPASIKDQPFRRDLARARDLLARAGFAQ
GFEVTLDHASIQPTADIAQAIQANLGELGIKVTLVAGESRQVFTRTRARQHQLALLAWGP
DYFDPHTNAEAFNINTDNSDTARSRTLAWRNSWQDTELSERAAAAARETDARKRIAEYES
LQRDSQARSPFAIMLQSQETAALRKVVTGFEIAPLSGRNVFYTASKTA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgctgacccgtcgcagtgttctggccgcctcggccgcgaccgctttcgttccgtcggcg
tttgccgccaccccgaaggatgtgctggtggttggccagcaactggagcaactgatcagc
ctcgatcccggcgagaccttcgaggtgaacggtggcgaggcagtgagcaactgctacaac
cgcctgctggagcccgatcccgccgacccgaaccgcctgaagggggatctggccgagaca
tgggaggtcgccccggacggcgtcaccttcacgttccacctgcgcggcaatgcgaaattc
gccaccggcaagccggtcaccgccgaggatgcggccttttcgctgcaacgcgcggtgaag
ctgaacaagacgccggccttcatcctcacccagttcggcttcgccagggacaacgtcgat
gtccgcatcgtcgcgcccgatccccgcaccctggtgctgacggtcggcgcccaggtcgcg
ccgaccctgttgctgtattgcctcaccgccaacgtcgccagcgtggtcgaaaaagccgag
gtgctggccaatgcccagggagatgatctcggcaaccagtggctgaagacccatagcgcc
ggcagcgggccgtacgtgctgcgcaactggaaggccaacgagacggtgctctacgagacc
aacccgcatgccctggtccgcccgaaaacgcggcgcgtcattgtcaagcacatcgccgat
ccatccgcgcagttgctgcaactgcagaagggcgacatcgacatcgctcgcgatctccag
gccgagcagttgcgtgccgccgaggccgacccgtcgctgcgactctctcgggcgctgcgg
ggctcgctgctctatgtgggcatgaaccaggcgcaccccgctttggcccggcccgaggtg
cgccaggcgatcaagtgggcgatcgactacgacgccatccagaagaacatcacccccttc
acccaccgggtgcaccagagcttcctgcccgaaggcttccccgcttccatcaaggaccag
ccgttccgccgcgacctggcccgggcccgcgacctgctcgcccgtgccgggttcgcccag
ggcttcgaggtgacgcttgaccatgcctccatccagcccactgccgacattgcccaggcg
atccaggctaacctgggggaactcggcatcaaggtgacgctggtcgccggcgaaagtcgc
caggtgttcacccgcacccgcgcccgccagcatcagcttgccctgctcgcctgggggccg
gactatttcgatccgcacaccaacgccgaagccttcaacatcaacaccgacaattccgac
acggcccgcagccgtacgctcgcctggcgcaattcctggcaggacaccgagctgagcgag
cgtgccgccgccgccgcgcgcgaaaccgacgccaggaagcgcatcgccgaatacgagtca
ctgcagcgcgattcacaggcccgcagcccctttgccatcatgctgcagagccaggaaacc
gcggcgctgcgcaaggttgtcacgggcttcgagatcgcgccgctgtcgggtcgcaacgtc
ttctacaccgccagcaagaccgcgtga
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