Rhodovastum atsumiense: RHOA_1381
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Entry
RHOA_1381 CDS
T08162
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rap03032
]
RHOA_1381 (hupA)
03036 Chromosome and associated proteins [BR:
rap03036
]
RHOA_1381 (hupA)
03400 DNA repair and recombination proteins [BR:
rap03400
]
RHOA_1381 (hupA)
DNA replication proteins [BR:
rap03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RHOA_1381 (hupA)
Chromosome and associated proteins [BR:
rap03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RHOA_1381 (hupA)
DNA repair and recombination proteins [BR:
rap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RHOA_1381 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
VWA_3
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
CAH2599975
LinkDB
All DBs
Position
RHOA:complement(1454989..1455258)
Genome browser
AA seq
89 aa
AA seq
DB search
MSKAFIAQVIQESTNLTGTASNRAAGDLMAAIVKELKKNGRFTLPSFGTFIVRKTKARKG
LNPRTGEAIKVKAGKTVRFKASPTLKKAV
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagccttcatcgcacaggtcatccaggagtccaccaacctgaccggcacggcc
tcgaaccgcgccgcgggcgacctgatggctgccatcgtcaaggaactgaagaagaacggc
cgcttcacgctgcccagctttggcactttcattgtccgcaagaccaaggcgcgcaagggc
ctgaacccgcgcaccggcgaggcgatcaaggtgaaggcgggaaaaaccgttcgcttcaag
gcctcgcctacgctgaagaaggcggtctga
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integrated database retrieval system
