Rhodovastum atsumiense: RHOA_1411
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Entry
RHOA_1411 CDS
T08162
Symbol
mdtB
Name
(GenBank) multidrug efflux pump RND permease subunit MdtB
KO
K07788
multidrug efflux pump
Organism
rap
Rhodovastum atsumiense
Pathway
rap02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RHOA_1411 (mdtB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_1411 (mdtB)
Transporters [BR:
rap02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RHOA_1411 (mdtB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
CAH2600006
LinkDB
All DBs
Position
RHOA:1482928..1486047
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AA seq
1039 aa
AA seq
DB search
MNISAPFIARPIATGLLAVAVMLAGLLGYRALPVSALPQVDFPTIQVTTQLPGANPDTVA
TLITASLERQFGQIQGLSTMTSTSSEGTSQITLQFSLERSIDSAAQDVQAAINASAGTLP
VNLPYPPVYAKVNPADAPILTLALMSEAITLDRVSDAADTLLQPKLSQIDGVGRVAVQGN
MRPAVRVRVDPARLAAYGLSLEDVRSAVAAANVNGAKGGFDGPRQAFALDANDQLVSPEA
YRDLVIAWRSTAPVRLSDVGSVIGGVENDRVAAWYHGPDGQTRKAVLLDIQRQPGANIVQ
TVERIRQALPQLQRAMPSAIRMVVVTDRTETIRASVADVQFTLVLAIVLVVLVIYVFLRS
WRATAIPAVALPLSLIGTFGVMALCGYGLDNLSLMALTVATGFVVDDAIVMIENVVRYIE
AGEGPLAAAYKGARQIGFTIVSLTVSLIAVFIPLLFMTGVVGRLFSEFAVTLSVAVVVSA
VISLTLTPMMCGRLLRPSAEEKPGWVARAFDAGFHRLLAGYATTLRWSLRHQTLMLVLAA
ATLAGTVALYVVVPKGFLPQQDTGVIVAVTEAAQSISIPRMSALQERAADIVREDPAVVS
VASFVGAGAINPTPNTGRLTIALKPRRQRDADAATIAARLQQRLAGIPGLSIFMQPVQDI
QIGTRVSRTQYQYTLMDTDPVELSRWAPRLLERLRASPVLRDVASDQQDEGFRTFVRIDR
DAALRLGVSMQAVQDTLYDAFGQRQISTIFAQANQYRVVLEADPAWQADPNALQRLRVPG
SAATVGNNQVPLSAIARIERVTAPLAVTRQAQFPSVTLSFNLAPDASLGEAVRTVAEAEQ
EIGLPATISGNYSGDAAEFQKSLSSQPWLILAAVVVIYIVLGVLYESLIHPVTILSTLPS
AGIGALLALMLVGEDLSLVALVGLVLLMGIVKKNAIMMVDFAIEAERERGIAPEAAIEEA
SLLRFRPIMMTTMAALLGALPLVIEQGTGSELRFPLGVTIVGGLLLSQVLTLYTTPAIYL
AFEKLRLRFFRAPRTAPAE
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctccgccccgttcatcgcccgcccgatcgcgaccgggctgctggcggtcgcg
gtcatgctggccgggctgctcggctaccgggcgctgccggtctcggcgctgccgcaggtc
gatttccccaccatccaggtcaccacccaattgccgggcgccaacccggacacggtggcg
acgctgatcaccgcctcgctggagcggcagttcggccagatccagggcctgagcacgatg
acctccaccagctcggagggcaccagccagatcaccctgcaattctcgctcgaacgcagc
atcgacagcgcggcgcaggacgtgcaggccgccatcaacgcctcggccggcacgctgccg
gtcaacctgccctacccgccggtctatgcgaaggtgaacccggccgacgcgcccatcctg
accctggcgctgatgtcggaggcgatcacgctcgaccgggtcagcgacgccgcggatacg
ctgctgcaacccaagctcagccagatcgacggcgtcggccgggtcgccgtgcagggcaac
atgcgcccggcggtgcgggtgcgggtcgatcccgcgcgcctcgccgcctacggcctgtcg
ctcgaggacgtgcgcagcgcggtcgccgcggccaacgtgaacggtgccaagggcggcttc
gacggcccccgccaggccttcgccctggacgccaacgaccagctggtctcgccggaggcc
tatcgggacctggtgatcgcctggcgcagcaccgccccggtgcggctgagcgatgtcggc
agcgtgatcgggggtgtggagaacgaccgcgtcgccgcctggtaccacggccccgacggg
cagacccgcaaggccgtgctgctggacatccagcgccagcccggtgccaacatcgtgcag
accgtcgagcgcatccggcaggccctgccccagttgcagcgcgccatgccctcggcgatc
cgcatggtggtggtcaccgaccgcaccgagacgatccgcgccagcgtcgccgatgtccag
ttcaccctggtcctggcgatcgtgctggtggtgctggtgatctacgtcttcctgcgctcc
tggcgcgccaccgcgatcccggcggtggcgctgccgttgtcgctgatcggcaccttcggg
gtgatggcgctgtgcggctacggcctggacaacctctcgttgatggccctgaccgtcgcc
accggcttcgtggtcgatgacgccatcgtcatgatcgagaacgtggtccgctacatcgag
gccggggaaggcccgctcgccgccgcctacaagggggcgcggcagatcggcttcaccatc
gtctcgctgaccgtctcgctgatcgcggtgttcatcccgctgctgttcatgaccggcgtg
gtcggccggctgttcagcgaattcgcggtgacgctgtcggtcgcggtggtggtctcggcg
gtgatctcgctcacgctgacgccgatgatgtgcgggcggctgctgcgcccgtcggcggag
gaaaagcccggctgggtggcgcgcgccttcgatgccggattccaccggctgctggccggc
tacgccaccaccctgcgctggtcgctgcggcatcagacgctgatgctggtgctcgccgcc
gccaccctcgccggcaccgtcgcgctctatgtcgtggtgccgaagggcttcctgccgcag
caggacaccggcgtcatcgtcgccgtcaccgaagcggcgcagagcatctccatcccgcgc
atgagcgccctgcaggaacgcgccgccgacatcgtccgcgaggacccggcggtggtctcg
gtggcgagcttcgtcggcgccggcgcgatcaatcccacccccaacaccggccgcctgacc
atcgcgctgaagccgcgccggcagcgcgacgcggacgccgcgaccattgccgcccggctg
cagcagcgcctcgccgggatccccggcctgtcgatcttcatgcagccggtgcaggacatc
cagatcggcacccgcgtcagccgcacccagtaccagtacacgctgatggacaccgacccg
gtggaactcagccgctgggcgccgcgcctgctggagcggctgcgcgcgagcccggtgctg
cgcgacgtcgccagcgaccagcaggacgagggcttccgcaccttcgtgcgcatcgaccgc
gacgccgcgctgcggctgggggtgtcgatgcaggcagtgcaggacacgctgtacgacgcc
ttcggccagcgccagatctccaccatcttcgcccaggccaaccagtaccgcgtggtgctg
gaggccgatccggcctggcaggccgatccgaacgcgctgcagcgcctgcgcgtgcccggc
tccgccgcgaccgtgggcaacaaccaggtgccgctgtcggccatcgcccgcatcgagcgc
gtcaccgccccgctcgccgtcacccgacaggcgcagttcccctcggtgacgctcagcttc
aacctcgcccccgacgcctcgctcggggaggcggtgcggacggtggccgaggccgaacag
gagatcggcctgcccgccaccatctcgggcaattattccggcgacgcggccgagttccag
aaatcactgtccagccagccctggctgatcctggccgcggtcgtggtgatctacatcgtg
ctcggcgtgctgtacgaaagcctgatccaccccgtcaccattctctccaccctgccctcg
gccggcatcggcgcgctgctggcgctgatgctggtgggggaggacctgtcactggtggcg
ctggtcgggctggtgttgctgatgggcatcgtcaagaagaacgccatcatgatggtggac
ttcgccatcgaggccgagcgcgagcgcggcatcgccccggaagcggcgatcgaggaggcc
agcctgctgcgcttccgcccgatcatgatgacgacgatggccgccctgctcggcgcgctg
ccgctggtgatcgagcagggcaccggcagcgagctgcgcttcccgctcggcgtcaccatc
gtcggcgggctgctgctcagccaggtgctgacgctctacaccacgccggcgatttatctg
gccttcgagaagctgcggctgcgcttcttccgcgcgccacggaccgcgccggcggaatga
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