Rhodovastum atsumiense: RHOA_1418
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Entry
RHOA_1418 CDS
T08162
Name
(GenBank) Uncharacterized RNA methyltransferase CC_1326
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rap03009
]
RHOA_1418
Enzymes [BR:
rap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RHOA_1418
Ribosome biogenesis [BR:
rap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RHOA_1418
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
CAH2600013
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All DBs
Position
RHOA:1495745..1496983
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AA seq
412 aa
AA seq
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MGADGDGIAALADGTPLYLPGTLPGEHVHAHAIAARGEGWACGVDAVVAPSPDRVPPPCP
HFGTCGGCTLQHWRQDAYLAWKAGLLATSLRGTAPPAPVAVTPPGTRRRMDLALRRRGAG
VVVGLHAPRSTEVIDLEGCAVLHPGLAGLLPRLRELLRATTVLRREGSAIVNLLDDGPDL
LLRTDAPPSSADRTKLAAFAQAHGLPRISWAAGNGVPETVCLLRPARITLAGVAVQPPPG
AFLQASESGEAAIVQAVLAGLPPRLPARARVAELYAGCGTLTFALARQVRVAAYEGDAAA
AGALHNAVNANGLAGRVSVDIRDLVRRPLLETELGGFAAVVLDPPYAGAAAQIARIAAAR
VARVIYVSCNPAALAQDARSLQAAGYQVLSAVPVDQFLWSTRLESVVTFARV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcggatggggacggcatcgccgccctggcggacggaaccccgctttatcttccc
ggcaccctgcccggtgaacacgtgcacgcccacgcgatcgcggcgcgcggcgagggctgg
gcctgcggcgtggacgcggtggtggcgccgagccccgaccgtgttccccctccctgcccg
catttcggcacctgcggcggctgcacgctgcagcactggcggcaggatgcctacctggcc
tggaaggccgggctgctggcgacgtcgctgcgtggcaccgccccccccgccccggtggcg
gtcacgccgccggggacacgccgccggatggacctggccttgcgccgccgcggcgccggg
gtggtggtcggcctgcatgccccgcgctcgaccgaggtcatcgacctggagggatgcgcg
gtcctgcatcccgggctcgccggactgctcccccgactgcgcgaactgctgcgcgccacg
acagtgttgcgccgggagggctcggcgatcgtcaacctgctcgatgacggtccggacctg
ctgctgcgcaccgatgccccgccatcttccgccgaccgcacgaagctggccgccttcgcc
caggcccatgggctgccccgcatctcctgggccgccggcaacggcgtgccggaaacggtc
tgcctgctgcgcccggcgcgcatcaccctggccggggtcgcggtgcagccgccgccgggc
gccttcctgcaggcgagcgaaagcggcgaggcggcgatcgtccaggcggtgctcgcgggc
ctgccaccccggctgccggcccgcgcgcgggtggccgagctgtacgccggctgcggcacg
ctgaccttcgccctggcccgccaggtccgggttgccgcctacgaaggcgacgcggcggcc
gcgggcgcgctgcacaacgcggtgaacgcgaacggcctggccggacgggtcagcgtggat
atccgggatctcgtgcgccggcccttgctggaaacggaactcggcggcttcgccgcggtg
gtgctggatccgccttatgcgggcgcggcggcccagattgcccggatcgcggcagcgcgg
gtggcgcgggtgatttatgtcagttgcaatccggcggccctggcgcaagacgccagaagc
ttgcaggcggccggttatcaggtgctgtcggcagtgccggtcgaccagttcctgtggtca
acccggctggagagcgtcgtgactttcgcccgggtctga
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