Rhodovastum atsumiense: RHOA_1440
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Entry
RHOA_1440 CDS
T08162
Symbol
dapE
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00300
Lysine biosynthesis
rap01100
Metabolic pathways
rap01120
Microbial metabolism in diverse environments
rap01230
Biosynthesis of amino acids
Module
rap_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RHOA_1440 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rap01002
]
RHOA_1440 (dapE)
Enzymes [BR:
rap01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RHOA_1440 (dapE)
Peptidases and inhibitors [BR:
rap01002
]
Metallo peptidases
Family M20
RHOA_1440 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
CAH2600035
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All DBs
Position
RHOA:1514986..1516119
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AA seq
377 aa
AA seq
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MTPAPLHDPLPLAQALIRCASVTPADAGAQAVLAETLERLGFTVTRLRFGEIENLFARIG
TAGPHLCFAGHTDVVPAGDAGWSAGPFDGTVRDGMLYGRGACDMKGAVAAFVAACAGHLA
DGPPRGSISLLITGDEEGVAIDGTARVLEWMAEAGQVPDFCVVGEPTNPARLGEMIKIGR
RGSLNARIAVHGRQGHVAYPHRADNPVHRLVHVLSALTAAPLDAGSDWFEPSSLQVTSID
VGNPATNVIPAIARAALNIRFNDRHSGATLTAWLRAVLAQHAGQFELEVAVSGESFLTAP
GPLLERLQAAVHGVTGLEPQLDTGGGTSDARFISRLCPVAEFGLVGSTMHQVDERVPVED
LRQLARVYRHLLDTVLT
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
ttgacccccgccccgctgcacgacccgctgccgctcgcccaggcgctgatccgctgcgcc
tcggtgacgccggcggatgcgggcgcccaggccgtgctcgccgagacgctggaacggttg
ggcttcaccgtcacccgcctgcgcttcggcgagatcgagaacctgttcgcccgcatcggc
accgccggcccgcatctctgcttcgccggacacaccgacgtggtgccggcgggtgatgcc
ggctggtccgccgggccgttcgacggcaccgtgcgcgatggcatgctctatggccgcggc
gcctgcgacatgaagggggcggtcgccgccttcgtggccgcctgcgccgggcatctcgcg
gatggcccgccgcgcggctcgatcagcctgctgatcaccggcgacgaggaaggggtcgcg
atcgacggcacggcgcgcgtgctggaatggatggcggaagccgggcaggtgcccgatttc
tgcgtcgtcggcgagcccaccaacccggcccggctgggcgagatgatcaagatcggccgc
cgcggcagcctgaacgcgcgcatcgccgtgcatggccggcagggccacgtcgcctatccg
caccgggccgacaatccggtgcaccggctggtgcacgtgctctcggcgctgaccgcggcg
ccgctggatgccggcagcgactggttcgagccctccagcctgcaggtcaccagcatcgac
gtcggcaaccccgccaccaacgtcattcccgccatcgcccgcgccgcgctgaacatccgc
ttcaacgaccgccacagcggcgccacgctcaccgcctggctgcgggcggtgctggcgcaa
catgccgggcagttcgagctggaggtggcggtcagcggcgaaagcttcctcaccgcgccc
ggcccgctgctggagcggctgcaggcggcggtccacggcgtcaccggcctcgagccgcag
ctcgacaccggcggcggcacctcggatgcgcgcttcatctcccggctctgcccggtcgcc
gagttcggcctggtcggcagcaccatgcaccaggtggacgagcgcgtgccggtcgaggac
ctgcgccagctcgcccgtgtctatcgtcacctgctggacacggtgctgacatga
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