Rhodovastum atsumiense: RHOA_1471
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Entry
RHOA_1471 CDS
T08162
Name
(GenBank) Penicillin-binding protein 2 (PBP-2)
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00550
Peptidoglycan biosynthesis
rap01100
Metabolic pathways
rap01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RHOA_1471
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RHOA_1471
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rap01011
]
RHOA_1471
Enzymes [BR:
rap01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RHOA_1471
Peptidoglycan biosynthesis and degradation proteins [BR:
rap01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RHOA_1471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
CAH2600066
LinkDB
All DBs
Position
RHOA:complement(1539735..1541648)
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AA seq
637 aa
AA seq
DB search
MDPILAARHNEAIMRREAQRTGVFTRRALLVATGQVGVLGLLGAKLYQVQVVEGARYATL
AESNRISARLVAAPRGRVLDRFGVVAAGNELNWRALLVAEQTEDVSATLDNFSRIVPLAD
HERARIEREMRRHRRFVPISVREFLSWEEMARIEVNAPDLPGILVDVGTTRMYPFGPTLA
HVIGYVAPPNENDVADDPMLSLPGLRIGRAGIEKWHDKPLRGRAGAVQLEVNAVGRVIRE
LDRQEGVKGQDIGLSIDTELQKAVLERLGDESASAVVMDCRTGEVLAMATNPSFDPTLFN
SGVSQAQWAEWTRNRRAPLINKAVAGLYAPGSTFKMVVALAGLEAKVISPTDRINCPGHL
DLGDTRFHCWRKGGHGLLDVRSAIKHSCDVFFYEVARRVGIDRIAAMANRFGLGVKLPIE
LPGARQGLVPTRAWRIGQGHPWNLGDTIVHGIGQGFLQLTPLSLAVMTSRIATGRAVQPH
LTRSIGGVLQAGARPEDWPLLGIADRDLGIVRDGMWQVVNDGGGTATVARLAIPGVQLAG
KTGSTQVRRVSREQREKGFKSETLAWEFRPHALFVAYAPYDAPRYAMAIVVEHGNAGAAA
AAPVARDIMTVALTRDPLGRRDPSQRMADMPPKEPGR
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
ttggatcccattctcgctgcgcggcacaacgaggcgatcatgaggcgcgaggcacagcgg
acgggagtgtttacccgacgggccctgctggtggcgacggggcaggtgggggtgctgggg
ctgctgggggccaagctgtaccaggtccaggtcgtcgagggcgcccgctacgccacgctc
gccgaaagcaaccggatcagcgcacgcctggtggcggccccacggggacgggtgctggac
cgtttcggcgtcgttgcggctggcaacgagctgaactggcgggccttgctggtggcggag
cagaccgaggacgtctccgccacgctcgacaatttctcccgcatcgtgccgctggccgat
cacgaacgggcccgcatcgaacgcgagatgcgccggcaccgccgcttcgtgccgatctcg
gtgcgcgagttcctctcctgggaagaaatggcgcgcatcgaggtgaatgcgcccgacctg
cccggcatcctggtcgatgtcggcaccacgcggatgtatccgttcggcccgacgcttgcg
catgtcatcggctatgtcgccccgcccaacgagaacgatgtcgccgatgatccgatgctg
tcgctgccgggcctgcgcatcggccgcgccggcatcgagaaatggcacgacaagcccctg
cgcgggcgggccggggcggtgcagctcgaggtcaacgcagtcggccgggtgatccgcgaa
ctcgaccggcaggaaggcgtgaagggccaggatatcggcctgagcatcgataccgaactg
cagaaggcggtgctggaacggctcggcgacgagagcgccagcgccgtggtgatggattgc
cgcaccggcgaggtgctggcgatggcgaccaatccctcgttcgatccgaccctgttcaat
tcgggcgtgtcgcaggcgcaatgggcggaatggacgcgcaatcgccgggcgccgctgatc
aacaaggcggtcgccggcctctatgcgccgggctccaccttcaagatggtggtggcgctg
gcggggctggaagcgaaggtgatctcccccaccgaccgcatcaattgccccgggcacctg
gatctcggcgacacccgcttccactgctggcgcaagggcggccatgggctgctcgacgtg
cgcagcgcgatcaagcattcctgcgacgtcttcttctacgaagtggcgcggcgcgtcggc
atcgaccgcatcgccgcgatggcgaatcgtttcggcctgggcgtgaagctgccgatcgaa
ctgccgggcgcgcgccagggcctggtgccgacccgcgcctggcgcatcggccagggccat
ccgtggaatctcggcgacaccatcgtgcatggcatcggccaggggttcctgcagctgacg
ccgctgtcgctcgcggtgatgacctcgcgcatcgccaccggccgggcggtgcagccgcac
ctgacccgcagcatcggcggcgtgctgcaggccggcgcgcggcccgaggactggccgctg
ctcggcatcgccgaccgtgaccttgggatcgtgcgcgacggcatgtggcaggtggtcaat
gacggcggtggcaccgcgacggtggcgcggctcgcgatcccgggcgtgcagctcgccggc
aagaccggctcgacgcaggtgcgccgggtctcacgcgaacagcgcgagaagggcttcaag
tcggagacgctcgcctgggaattccggccgcatgcgctgttcgtggcctatgccccgtat
gacgcgccgcgctacgcgatggcgatcgtggtcgagcacggcaatgccggggccgcggcg
gcggcgccggtggcgcgcgacatcatgaccgtggcgctgacgcgcgacccgctgggacgg
cgcgatccgtcgcagcgcatggccgacatgcccccgaaggagccggggcggtga
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