Rhodovastum atsumiense: RHOA_1540
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Entry
RHOA_1540 CDS
T08162
Symbol
smc
Name
(GenBank) Chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rap03036
]
RHOA_1540 (smc)
Chromosome and associated proteins [BR:
rap03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
RHOA_1540 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAH2600135
LinkDB
All DBs
Position
RHOA:1614702..1618493
Genome browser
AA seq
1263 aa
AA seq
DB search
MPVSFSRLRIAGFKSFAEPVVVDLLPGLTGIVGPNGCGKSNVVEALRWAMGENSARSLRG
GEMDDVIFAGTAHRPSRNIAEVTLQLTETQGAAPPPFHEAPELEISRRIERGAGSLYRVN
GREARARDVQTLFADLATGARSSGMISQGRVGTIVNARPDDRRAILEEAAGITGLHARRH
EAELKLRAAEANLARAEDLRGQLEGQLDGLKRQARQANRYRAISGLIRTAEAELLAIQRA
KVETARAAAQRALHAAGTAVAEATTEATTATEAATAAAAALPPLRETEGEARTALERHRL
AGEQIAAEEARAQEALQAATARLEQVTRDLAHAGQVKQDAAAALDRLAAELARIEAEDAA
HPAHMDRAEAAAAEAAEAARAADAAATRATEHAADLAARHRALSEALAAAETRMRRLTEQ
QSRLAAERAEVTAQLVDPAALQATEAEREAAEAALADARATLEQAEQARAAALQEAARSR
AAAAEEAQRLRATGTETAAKLRRAAQEDAAKLRADSRERALRLRTEAQAALAAAREAATT
AESARAKLAAEAQALAEVLSARDGERWPRMVDQLTVPAGLEAALGAALGEELDSAANTDA
ARHWRELPPLDPMPPLPDGVPSLAGLVQAPAALARALSQIGLVEDGGAAQPRLLPGQVLV
SRAGAVWRWDGYVIQAGTPTPAAIRLQQRNRLAELRTRLAAATEQAEAARAARTEAEAAE
RAARAEADSIERAAQAEAESRERGARAEAEAAERAARESAERLERESRAAAEAAERSANA
AEQQARTARRDTEQRLERARAAASALATRAANAEARRAALDSQDARLAAEAAEAEAGLRD
ARAAMAGLDDPAAARTAMDQARDALATARARESETREARDALGRAAGGRAHRRRTLEAER
GDWTMRAQDAEGRLIDLTARANEVRAEHAALQAAPAEIAVRRAAALQALEAAQATHRQAA
DVLHRAEQEASAADRHARAAEAALAAAREHVVRAEGDATAADQAWGVVAERILERLGDNP
TLPDPPAEIGPDTEDKARRKLERLQREREEMGPVNLRAEVEAEEIGKQIDTIAREREELT
TAIAKLRGSIGHLNREGRERLSQVFAEVDQHFQALFTRMFGGGRAHLALVGSDDPLEAGL
EIYAQPPGKKLATLSLLSGGEQALTALSLIFAVFRCNPAPVCVLDEVDAPLDEANVERFC
TLLEDMVRETGTRFLVVTHHHVTMARMDRLYGVTMQERGVSRVLSVDLQRASEMVDPPRM
AAE
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgtcagcttcagccgcctgcgcatcgcgggattcaagagctttgccgaaccggtc
gtggtcgacctgctgccgggcctgaccggcatcgtcggcccgaacggctgcggcaagtcc
aacgtggtggaggccctgcgctgggcgatgggcgagaactccgcccgctcgctgcgcggc
ggcgaaatggacgacgtcatcttcgccggcaccgcccaccgcccctcgcgcaacatcgcc
gaggtcacgctgcagctgaccgagacgcagggggccgcgccgccgcccttccacgaagcg
cccgagctggagatctcccgccgcatcgagcgcggcgccggcagcctctaccgcgtcaac
ggccgcgaggcacgggcgcgcgacgtgcagaccctgttcgccgacctcgccaccggcgcg
cgctcctccggcatgatcagccagggccgcgtcggcaccatcgtcaatgcccgccccgac
gaccggcgggcgatcctggaagaagccgccggcatcaccggcctgcacgcccgtcgccac
gaggccgagctgaagctgcgcgccgccgaggccaacctcgcccgcgccgaggacctcagg
ggccagttggaaggccagctcgacgggctgaagcggcaggcgcgccaggccaaccgctac
cgcgcgatttccggcctgatccgcaccgccgaggccgagttgctggcgatccagcgcgcc
aaagtggaaaccgcccgcgccgccgcgcagcgggcgttgcacgcggccggaaccgccgtg
gccgaggccaccaccgaagccaccaccgccaccgaagccgccaccgccgccgccgccgcc
ctgccgccgctgcgcgagaccgagggcgaggcccgcaccgcgctggaacgccaccggctc
gccggcgagcagatcgccgccgaggaggcgcgcgcccaggaagccttgcaggccgccacc
gcccggctggaacaggtgacgcgcgacctcgcccatgccggccaggtgaagcaggacgcc
gccgccgcgctcgatcgccttgccgccgaactggcacggatcgaggccgaggacgcggcc
catccggcgcacatggaccgcgccgaggccgcggcggcggaagcggcggaggccgcccgt
gccgccgatgccgccgccacgcgggcgaccgagcacgccgccgacctcgccgcccgccac
cgcgcgctgtccgaggcgctggccgccgccgagacgcgcatgcgccggctgaccgagcaa
cagtcgcggctggccgccgagcgcgccgaggtcactgcccaactggtcgatcccgccgcg
ctgcaggcgaccgaggccgagcgcgaggccgcggaagccgcgctggccgacgcacgtgcc
accctggaacaggccgagcaggcccgtgccgctgccttgcaggaagccgcccgcagccgc
gccgccgccgccgaggaagcacagcgcctgcgcgccaccgggaccgagaccgcggcgaaa
ctgcgccgcgccgcccaggaagacgcggcgaagctgcgggccgactcacgcgagcgggca
ttgcgcctgcgcaccgaggcccaggcggcgctggccgccgcgcgcgaggccgccaccacc
gccgaatcggcacgggcgaaactcgccgccgaggcacaggccctggccgaggtgctgtcc
gcccgcgacggcgagcgctggccgcgcatggtcgaccagctcaccgtgccggccggtctg
gaagccgccctcggcgcggcgctcggcgaggagctggactcggccgccaacaccgacgcg
gcgcggcactggcgcgaattgccgccgctcgacccgatgccccccctgcccgatggcgtg
ccctcgctggccgggctggtgcaggcgccggcggcgctcgcccgcgccctgtcgcagatc
gggctggtggaggatggcggcgcggcgcagccacggctgctgccgggacaggtgctggtc
tcgcgcgccggcgcggtgtggcgctgggacggctacgtcatccaggccggcaccccgacc
ccggccgcgatccgcctgcagcagcgcaaccgcctcgccgagttgcgcacccgcctcgcc
gccgccaccgaacaggccgaggccgcccgcgctgcccgcaccgaggccgaggccgccgaa
cgcgccgcccgcgccgaggcggacagtatcgaacgtgccgcccaggccgaggcggaaagc
cgcgagcgcggcgcccgcgccgaggccgaggccgccgaacgcgccgcccgcgaatcggcc
gagcgactcgaacgcgagtctcgcgccgccgccgaagccgcggaacggagcgcaaacgcc
gccgagcagcaggcccgcaccgcccgccgcgacaccgagcagcgcctcgaacgcgcccgc
gccgccgccagcgcgctggccacccgcgccgccaacgccgaggcacgccgcgccgccctc
gacagccaggacgcccggctcgccgccgaggcggcggaggccgaagccgggctgcgcgac
gcccgcgccgccatggccgggctcgacgaccccgccgccgcccgcaccgccatggaccag
gcgcgtgacgccctggccacggcacgcgcccgcgagagcgagacccgcgaggcccgcgac
gcgctcggccgtgccgccggcgggcgggcccatcgccgccgcaccctggaggcggaacgt
ggcgactggacgatgcgggcgcaggatgccgaagggcggctgatcgacctgaccgcccgc
gccaacgaagtccgcgccgaacacgccgccctgcaggccgcgccggccgagatcgccgtg
cgccgcgccgccgccctgcaggcgctggaagccgcccaggccacccaccgccaggccgcc
gacgtgctgcaccgggccgagcaggaagcaagcgcggccgaccgccacgcccgcgccgcc
gaagcggcgctggccgccgcgcgcgaacacgtcgtccgcgccgagggcgacgccaccgcg
gccgaccaggcctggggcgtggtcgccgaacgcatcctcgaacgcctcggcgacaacccc
actttgcccgacccgcccgccgagatcggcccggacaccgaggacaaggcccgccgcaag
ctcgaacgcctgcagcgcgagcgagaggaaatggggccggtcaacctgcgcgccgaggtc
gaggccgaggagatcggcaagcagatcgacaccatcgcccgcgagcgcgaggaactcacc
accgccatcgccaagctgcgcggctcgatcggccatctcaaccgcgaaggccgcgagcgg
ctgagccaggtgttcgccgaggtggaccagcatttccaggcgctgttcacccgcatgttc
gggggcgggcgcgcccacctcgcgctggtcggctcggacgacccgctggaggcggggctg
gaaatctacgcgcaaccccccggcaagaaactcgccacgctgtcgctgctctcgggcggc
gaacaggccctgaccgcattgtcgctgatttttgcggtgttccggtgcaaccccgcgccc
gtctgcgtgctcgatgaggtcgatgcgcccctggacgaagcgaacgtggagcggttttgc
accctgctggaagacatggtccgggaaaccggcacgcggttcctggtggtgacacaccac
catgtgacaatggcccgcatggatcgcctgtacggcgtgaccatgcaggaacgcggcgtc
tcgcgggtgctctcggtcgatctgcaacgcgccagcgaaatggtcgatcccccccggatg
gcggcggagtag
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