Rhodovastum atsumiense: RHOA_1633
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Entry
RHOA_1633 CDS
T08162
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00300
Lysine biosynthesis
rap00470
D-Amino acid metabolism
rap01100
Metabolic pathways
rap01110
Biosynthesis of secondary metabolites
rap01120
Microbial metabolism in diverse environments
rap01230
Biosynthesis of amino acids
Module
rap_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RHOA_1633 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RHOA_1633 (dapF)
Enzymes [BR:
rap01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RHOA_1633 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
CAH2600229
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All DBs
Position
RHOA:complement(1721405..1722238)
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AA seq
277 aa
AA seq
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MDVPFLKMHGCGNDFVVLDLRAGLALTPARAAAIANRRTGVGCDQVIGIEPAPAGSRAAA
FMRIRNPDGSEAGACGNATRCVASLLAAETGRTVLAIQTISGTLPAELLPDGRVRVDMGP
ARLGWQEVPLAEAADTLHLDLTTGPVSDPAACSMGNPHATFFVDDLGTLPITTIGPVLEH
APLFPNRANIGFAQVLAPDRIRLRVWERGAGLTLACGSGACATLVNAARRGLTGRRATVV
VDGGELGIEWRDDGHVLMTGPVATAFRGSLAWEALPP
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgcccttcctcaagatgcatggctgcgggaacgatttcgtcgtgctcgacctg
cgtgccggcctcgcgctcacgcccgcccgcgccgctgccatcgccaaccggcgcaccggc
gtggggtgcgaccaggtgatcggcatcgagcccgcccccgcgggaagcagggccgcggcc
ttcatgcgcatccgcaatcccgacggcagcgaggccggggcctgcggcaacgccacgcgc
tgcgtcgcctccctgctcgcggccgagaccggccggaccgtgctggccatccagaccatc
agcggcaccctgccggccgaactcctgcccgacgggcgcgtccgcgtggacatgggcccc
gcgcggctcggctggcaggaagtgccgctcgccgaagcggcggacacgctgcacctcgac
ctcacgacgggtccggtgtccgacccggccgcctgctccatgggcaatccacatgcgacg
ttcttcgtggatgacctcggcaccctgccgatcaccacgatcgggccggtgctggaacac
gcccccctgttccccaaccgcgccaatatcggcttcgcccaggtgctcgcccctgaccgc
attcgcctgcgggtgtgggagcgcggcgccggcctcaccctggcttgcggttccggcgcc
tgcgccacgctggtgaacgccgcccgccgtggcctgaccgggcgccgcgccacggtggtg
gtggatggcggcgagctcggcatcgaatggcgggatgatggccatgtgctgatgaccggg
ccggtggccaccgccttccgcggcagcctcgcctgggaggcgctgccgccgtga
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