KEGG   Rhodovastum atsumiense: RHOA_1633
Entry
RHOA_1633         CDS       T08162                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
rap  Rhodovastum atsumiense
Pathway
rap00300  Lysine biosynthesis
rap00470  D-Amino acid metabolism
rap01100  Metabolic pathways
rap01110  Biosynthesis of secondary metabolites
rap01120  Microbial metabolism in diverse environments
rap01230  Biosynthesis of amino acids
Module
rap_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rap00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RHOA_1633 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RHOA_1633 (dapF)
Enzymes [BR:rap01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     RHOA_1633 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: CAH2600229
LinkDB
Position
RHOA:complement(1721405..1722238)
AA seq 277 aa
MDVPFLKMHGCGNDFVVLDLRAGLALTPARAAAIANRRTGVGCDQVIGIEPAPAGSRAAA
FMRIRNPDGSEAGACGNATRCVASLLAAETGRTVLAIQTISGTLPAELLPDGRVRVDMGP
ARLGWQEVPLAEAADTLHLDLTTGPVSDPAACSMGNPHATFFVDDLGTLPITTIGPVLEH
APLFPNRANIGFAQVLAPDRIRLRVWERGAGLTLACGSGACATLVNAARRGLTGRRATVV
VDGGELGIEWRDDGHVLMTGPVATAFRGSLAWEALPP
NT seq 834 nt   +upstreamnt  +downstreamnt
atggatgtgcccttcctcaagatgcatggctgcgggaacgatttcgtcgtgctcgacctg
cgtgccggcctcgcgctcacgcccgcccgcgccgctgccatcgccaaccggcgcaccggc
gtggggtgcgaccaggtgatcggcatcgagcccgcccccgcgggaagcagggccgcggcc
ttcatgcgcatccgcaatcccgacggcagcgaggccggggcctgcggcaacgccacgcgc
tgcgtcgcctccctgctcgcggccgagaccggccggaccgtgctggccatccagaccatc
agcggcaccctgccggccgaactcctgcccgacgggcgcgtccgcgtggacatgggcccc
gcgcggctcggctggcaggaagtgccgctcgccgaagcggcggacacgctgcacctcgac
ctcacgacgggtccggtgtccgacccggccgcctgctccatgggcaatccacatgcgacg
ttcttcgtggatgacctcggcaccctgccgatcaccacgatcgggccggtgctggaacac
gcccccctgttccccaaccgcgccaatatcggcttcgcccaggtgctcgcccctgaccgc
attcgcctgcgggtgtgggagcgcggcgccggcctcaccctggcttgcggttccggcgcc
tgcgccacgctggtgaacgccgcccgccgtggcctgaccgggcgccgcgccacggtggtg
gtggatggcggcgagctcggcatcgaatggcgggatgatggccatgtgctgatgaccggg
ccggtggccaccgccttccgcggcagcctcgcctgggaggcgctgccgccgtga

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