Rhodovastum atsumiense: RHOA_1694
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Entry
RHOA_1694 CDS
T08162
Symbol
uvrB
Name
(GenBank) excision nuclease subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rap
Rhodovastum atsumiense
Pathway
rap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RHOA_1694 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rap03400
]
RHOA_1694 (uvrB)
DNA repair and recombination proteins [BR:
rap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RHOA_1694 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RHOA_1694 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_16
AAA_22
SWI2_SNF2
Kinesin
SRP54
AAA_5
Microtub_bd
DUF87
CHAD
Motif
Other DBs
NCBI-ProteinID:
CAH2600290
LinkDB
All DBs
Position
RHOA:1769459..1771639
Genome browser
AA seq
726 aa
AA seq
DB search
MPQVLTRAAPVLFIPQKQAARPLTNRLRVVSDFAPNGDQPQAIRDLVAGVEAGERDQVLL
GVTGSGKTFTMAKVIEAVQKPTLILAPNKTLAAQLYGEMKAFFPDNAVEYFVSYYDYYQP
EAYVPRTDTYIEKDAQINEQIDRMRHAATQALLERNDVIIVASVSCIYGIGSVETYARMV
VKLQAGGRIDRDALAKALVELQYRRNDAGFSRGTFRLRGEVVDIWPSHYEDRAWRVTLFG
DEIESIGEFDPLTGTVATKLDAVTVYANSHYVTPRPTLTQAIADIKVELKQRLEAFTAAG
KLLEVERLQQRTTFDIEMMETTGSCKGIENYSRYLSGRNPGEPPPTLFEYLPENALLIVD
ESHVTVPQIGGMERGDHARKSVLSEFGFRLPSCLDNRPLKFEEWERFRPQTIFVSATPGP
WEMERTGGSFAEQVIRPTGLIDPVVEVRPVERQVDDLLAECRATTARGARVLVTTLTKRM
AEDLTEYLNENGVKVRYLHSDIDTLERIEIIRDLRLGVFDVLVGINLLREGLDIPECALV
AILDADKEGFLRSQTSLIQTIGRAARNVEGRVILYADTMTGSLRFAIEETERRRAKQQAW
NEAHGITPQSVKKQIGKVLESVFEQDYVTVAPVADTATTEFVGKDLRASIAELEKRMRAA
AADLEFEEAARLRDEIKRLEALDLGLEPPPAPSASLRPRRDRTPEPLGPGGGGYDPKKAK
RGRRGR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgccccaggtcctgacccgcgccgcccccgtcctgttcatcccgcagaaacaggcggcc
aggccgctgaccaaccggctgcgcgtggtctccgacttcgcgcccaacggcgaccagcct
caggccatccgcgatctggtggccggcgtcgaggccggcgagcgcgaccaggtgctgctc
ggcgtgaccggctcgggcaagaccttcaccatggcgaaggtgatcgaggcggtgcagaag
cccaccctgatcctcgcccccaacaagacgctggcggcccagctctacggggagatgaag
gcgttcttcccggacaacgcggtcgagtacttcgtcagctactacgattactaccagccg
gaagcctacgtcccgcgcaccgacacctatatcgagaaggacgcgcagatcaacgagcag
atcgaccgcatgcgccacgccgcgacccaggccctgctcgaacgcaacgacgtcatcatc
gtcgcctcggtctcctgcatctacggcatcggttcggtcgaaacctacgcgcgcatggtg
gtcaagctgcaggcgggcgggcggatcgaccgcgatgcgctcgccaaggcactggtggaa
ttgcaataccgccgcaatgatgccggcttctcgcgcggcaccttccgcctgcgcggcgaa
gtcgtcgacatctggccgagccattacgaggaccgcgcctggcgcgtgacgctgttcggc
gacgagatcgaaagcatcggcgaattcgacccgctgaccggcacggtggcgacgaagctg
gatgccgtcaccgtctacgccaacagccactacgtgacgccgcggccgaccctgacccag
gcgatcgccgacatcaaggtcgaactgaagcaacgcctggaggcgttcaccgcggcggga
aaattgctggaggtcgagcggctgcagcagcgcaccaccttcgacatcgagatgatggag
accaccggctcctgcaagggcatcgagaactattcccgctatctctccggccgcaacccg
ggcgagccgccccccaccctgttcgagtacctgccggagaacgcgctgctgatcgtggac
gaaagccacgtcaccgtgccgcagatcggcggcatggagcgcggtgaccacgcccgcaag
tcggtgctctcggaattcggcttccgcctgccctcctgcctcgacaaccgcccgctgaaa
ttcgaggaatgggagcgcttccgcccgcagacgatcttcgtctcggcaacccccgggccg
tgggagatggaacgcaccggcggcagcttcgccgagcaggtcatccgcccgaccgggctg
atcgacccggtggtggaagtccgcccggtcgagcggcaggtggacgacctgctcgccgaa
tgccgcgccaccaccgcccgcggcgcgcgcgtgctggtcaccaccctgaccaagcgcatg
gccgaggacctcaccgaatacctcaacgagaacggggtgaaggtgcgctacctgcactcc
gacatcgacacgctggagcggatcgagatcatccgcgacctgcggctcggcgtgttcgac
gtgctggtcggcatcaacctgctgcgcgagggactcgatatcccggaatgcgcgctggtg
gcgatcctggatgccgacaaggaaggcttcctgcgcagccagaccagcctgatccagacc
atcggccgcgccgcccgcaacgtcgagggccgggtgatcctgtacgccgacaccatgacc
ggcagcctgcgcttcgccatcgaggaaaccgagcgccgccgcgccaagcagcaggcctgg
aacgaggcacacggcatcaccccgcaatcggtgaagaaacagatcggcaaggtgctggag
agcgtgttcgaacaggactacgtgaccgttgccccggtcgccgatacggccaccaccgaa
ttcgtcggcaaggacctcagggccagcatcgccgagctggaaaagcggatgcgcgccgcc
gccgcggacctggaattcgaggaagcggcccggctgcgcgacgagatcaagcggctggaa
gccctggacctcggcctggagccgccgcccgcaccctccgcctcgctgcgcccccggcgc
gaccgcacccccgagccgctcgggcccggcggggggggatacgatccgaagaaggcgaaa
cgcggacgccgcggacgctga
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