Rhodovastum atsumiense: RHOA_1709
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Entry
RHOA_1709 CDS
T08162
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00541
Biosynthesis of various nucleotide sugars
rap01100
Metabolic pathways
rap01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RHOA_1709 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rap01005
]
RHOA_1709 (kdsB)
Enzymes [BR:
rap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
RHOA_1709 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
rap01005
]
Lipid A
RHOA_1709 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Glyco_transf_21
DUF2064
Motif
Other DBs
NCBI-ProteinID:
CAH2600305
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Position
RHOA:complement(1784905..1785654)
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AA seq
249 aa
AA seq
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MTPIVVIPARMASTRLPGKPLADIHGRPMILHVLDRAREAGIGPIAVACAESEIAEAVRA
AGAIAVMTDPALPRGSDRVHVALAALDPQGQHDVVVNLQGDLPTIPPEYLRTVLAPLADP
AVDIATLVAPITSPEEAASPSVVKAACGFDRGRAVAPALYFSRAAIPAGEGPLWHHIGIY
AFRRAALARFVALPESPLEKREALEQLRALEAGMRIACARVERPPFGVDTPADLERARDE
LDPARRSRP
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgatcgtcgtcattcccgcgcgcatggcttccacccgcctgcccggcaagccc
ctggccgatatccatggccgcccgatgatcctgcacgtgctcgaccgggcgcgcgaggcc
gggatcggcccgatcgcggtggcctgtgccgaatccgaaatcgccgaggcggtgcgcgcc
gcaggggcgatcgcggtgatgaccgatcccgccctgccgcgcggctcggaccgggtgcac
gtcgccctggccgcgctcgacccgcaggggcagcacgacgtggtggtcaacctccagggc
gacctgccgaccatcccgccggaatacctgcgcacggtgctggccccgcttgccgacccc
gcggtggacatcgccacgctggtggcgccgatcacctcgcccgaggaggcggcgtctcct
tcggtggtgaaggcggcctgcggcttcgaccgtggccgcgcggtggcgccggcgctctat
ttctcgcgcgccgccatccctgcgggcgaggggcccctgtggcaccatatcggcatctac
gccttccgccgcgccgccctggcgcgcttcgtcgccctgccggaatcgccgctggagaag
cgcgaggcgctggagcaattgcgtgcgctggaggcgggcatgcgcatcgcctgcgcccgc
gtcgagcgcccccccttcggcgtcgacaccccggccgatctcgaacgcgcccgcgatgag
ctcgatcccgcccgccggagccgtccgtga
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