Rhodovastum atsumiense: RHOA_1715
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Entry
RHOA_1715 CDS
T08162
Symbol
yejF
Name
(GenBank) putative oligopeptide ABC transporter ATP binding subunit
KO
K13896
microcin C transport system ATP-binding protein
Organism
rap
Rhodovastum atsumiense
Pathway
rap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHOA_1715 (yejF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rap02000
]
RHOA_1715 (yejF)
Transporters [BR:
rap02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
RHOA_1715 (yejF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_22
AAA_29
AAA_16
Mg_chelatase
nSTAND1
AAA_25
AAA_33
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
CAH2600311
LinkDB
All DBs
Position
RHOA:1791356..1792960
Genome browser
AA seq
534 aa
AA seq
DB search
MSLVRVEDLTVAFGERRVVDRVSFTLERGETLALVGESGSGKSLTALSLLQLLPPGASCG
GHVELDGQSMIGAPEAVLQQLRGARAGMVFQEPMNSLNPLARIGRQVGEAIQLHRPMSNG
ALRARVIELLSECGFPDAGQRLEAFPHQLSGGQRQRVMIAMALANDPALLIADEPTTALD
VTIQAQILKLLAAEKAARGLALLLISHDLAVVRRYADRVCVMKDGRVVESGRVDQVFTVP
QHPYTCALLAAEPRGTPRPIANDAEVLMQAKGLRVHFPIRRGVLRRTVGHVKAVDGLDIT
VHAGETVGLVGESGSGKSTTGFALLQLERAEGDIRFRGQKLDTLDRRALRRLRASMQIVF
QDPFGSLSPRLSVGEIIAEGLAVHEPGLSRAKRDARVAAALDEVGLPGECLGRYPHEFSG
GQRQRIAVARAMVLQPRFVVLDEPTSALDMSVQAQIVDLLRRLQQDRDLGYLFISHDLRV
VRALAHRVVVLRHGKVVEEGPADVVFAQPREDYTRALMAAAFSLEADETGVVQS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgtccgggtcgaggacctgaccgtcgccttcggggagcggcgggtggttgat
cgggtgtccttcaccctcgaacgcggcgagacgctggcgctggtcggcgagagcggatcg
ggcaagtcgctgaccgcgctgtcgctgctgcaattgctgccgcccggggcaagctgcggc
ggccatgtcgagctggacggccagtccatgatcggcgcgccggaggcggtgctgcagcaa
ttgcgcggcgcccgcgccggcatggtgttccaggagccgatgaacagcctcaacccgctc
gcccgcatcgggcggcaagtgggcgaggcgatccagttgcaccggcccatgtcgaacggg
gcgctgcgggcgcgggtgatcgagctgctgtcggaatgcggcttcccggatgccgggcag
cggctggaggcgtttccgcaccagctctccggcgggcagcgccagcgcgtgatgatcgcg
atggcgctggccaacgaccccgccttgctgatcgccgacgagcccaccacggcgctggac
gtgaccatccaggcgcagatcctgaagctgctggccgccgagaaggcggcgcgggggctt
gccttgctgctgatcagtcatgacctcgcggtggtgcggcgctatgccgaccgcgtctgc
gtcatgaaggacgggcgcgtggtggagagcggtcgggtcgaccaggtgttcaccgtgccg
cagcatccctatacctgcgcgctgctggccgccgagccgcgcgggacgccgcgcccgatt
gccaacgacgccgaagtgctgatgcaggcgaagggattgcgcgtgcatttcccgatccgc
cgcggcgtgctgcgccgcaccgtcggccatgtgaaggcggtggacgggctggatattacc
gtgcatgccggcgagacggtcgggctggtcggcgagagcgggtccggcaagtccaccacc
ggcttcgccctgctgcaactggaacgggccgagggcgatatccgcttccgtggccagaag
ctggacacgctcgaccggcgcgcgctgcggcggttgcgggcatcgatgcagatcgtcttc
caggatccgttcggcagcctctcgccacgcctgtcggtgggcgagatcatcgccgagggt
ctcgcggtgcacgagcccggcctgtcgcgggccaagcgcgacgcgcgggtggcggcggcg
ctggacgaggtcgggctgccgggcgagtgcctcggccgctacccgcacgagttcagcggc
gggcagcgccagcgcatcgcggtagcgcgggcgatggtgctgcagccgcgcttcgtggtg
ctcgacgagccgaccagtgcgctcgacatgagcgtgcaggcgcagatcgtggatctgctg
cgccggctgcagcaggatcgcgaccttggctacctgttcatcagccatgacctgcgcgtg
gtgcgggcgctggcgcatcgggtggtggtgctgcggcacggcaaggtggtcgaggaaggc
ccggccgatgtcgtgttcgcgcagccgcgcgaggactacaccagggcgctgatggccgcg
gcgttctcgctggaagcggacgaaactggagtcgtccagtcgtga
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