Rhodovastum atsumiense: RHOA_1732
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Entry
RHOA_1732 CDS
T08162
Symbol
glgX
Name
(GenBank) 4-alpha-glucanotransferase
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00500
Starch and sucrose metabolism
rap01100
Metabolic pathways
rap01110
Biosynthesis of secondary metabolites
Module
rap_M00565
Trehalose biosynthesis, D-glucose-1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RHOA_1732 (glgX)
Enzymes [BR:
rap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RHOA_1732 (glgX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_77
CBM_48
MalQ_N
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
CAH2600328
LinkDB
All DBs
Position
RHOA:complement(1806476..1810735)
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AA seq
1419 aa
AA seq
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MIAEGRPEPLGVVPEEDGVNVAVFSAHAEAVEICLFDATGEIELARLRLPGRTGAVFHGY
LPGVAPGARYGLRVHGPWQPAQGHRFNPAKLLLDPHAAAIDRPFRLDRALFDPPDAARPD
PIDSAPVMPKGIVLPPPDPIAPRPPFDWSRAVIYELHVRGFTMRHPDIPVEQRGTFAGLA
HPAAIAHLRRLGVTAVELLPSAAWIDERHLPALGLTNYWGYNPASFLAPDPRLAPGGWAE
VRSAVAALQQAGIAVLLDIVLNHTGESDRLGPTVSLRGLDHATYYRLATDDPGRCVDDTG
CGNALAVDRPPVMRLAMDALRCWALRAGVDGFRFDLAATLGRRPGGFDPAAPLLDAIAQD
PLLRGLVLIAEPWDLGPGGYRLGAFPPTWGEWNDRFRDGIRRFWRGDAGMLGELATRVAG
SADFFPPPRPVSRSINFVTAHDGFTLADLVAYTVKRNTPNGEGNRDGTNNSFSWNCGIEG
PTDDPSVRAARVRDARGLLTTLLFARGTPLISMGDEAGRTQHGNNNAYAQDNAGSWFDWE
GMDEPLVAFTAALIQARQDCPALRAAQALTGRSPDGNGLPDVIWRTARGQQMTSARWQDP
SNRTLVAVLYTPATPTEAADRVLLVLHAGTEAETIALPSPRAGFAWYLLTDSGSGEVGGV
GAGEAIDPLPIGPRSAVLLRELPAPRRRSIDDTEALHRLGRAAGIAPEWWDVEGRRYVVN
EDTTRALLQAMRLPAGNPGEVIDSLGLLSEDMGRKLPPALVVRAGEPVTLRLGPAVPWGR
LRLLVEREDGAQVPLAVAATEGVAEPLPTPDGRVLVTRRVALPPQPIGRHLIRIDGEPDG
ACCRLTVAPPRCHLPPLLRAGNRVFGVAAQLYSLRRAGGDQGVGDYTALARLAREAGREG
ASVIGLNPLHTLFRHDRMRASPYHPCDRRFLDAMPIDVAVLPVPPDAVRTRTALAGAAPA
FAKLSEVSLVDYPAVWEAKQRVLEAAFADFQARETAAPTDPLVQDFARFVAEGGTELQDL
ARFEAITELRGSSHWQVWPAELRDPRNPSVAAAAPSERVRFGCFLQWVADRQLAAAAAAA
RTAGMPLGFYRDLAVGAAPDGAEAWSAGASLMDRVSVGAPPDPFAPQGQVWGLPPPDPRA
MRESGYAAFARLLRANMRHAGALRIDHVMGLARLFIVPDGAPGHDGAYVAYPFDDLLGEV
ALESVRNNCLVVGEDLGTVPEGIREHLGGADVLSYQVLRFAREGAGLRPPGRYPVNAAAC
AATHDLPTLAGWWSGTDILERRALGLLSAAGADGAARARALEKAELLVLLRAEGLEIGSG
AVDEPMTELLMASIHALLARTPCRLVLVQADDLVGELTAVNLPGTDRERPNWRRRLRLGV
ETLCGAAPSVLAALRRREVAPARRASPPAGPVGDSGRHG
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggaagggcgccccgaaccgctcggcgtggttccggaagaggacggggtcaat
gtcgccgtcttctccgcgcatgccgaggcggttgagatctgcctcttcgatgcgacgggg
gagatcgaactggcccggctgcgcctgcccggccgcaccggcgccgtgttccacggctat
cttcccggcgtggcccccggtgcccgctacgggctgcgggtgcacgggccgtggcagccg
gcgcaggggcaccggttcaacccggcgaagctgctgctcgatccgcatgccgccgcgatc
gatcgtccgttccggctcgatcgcgcgctgttcgacccacccgatgcggcgcgtcccgat
ccgatcgacagcgccccggtgatgcccaagggcatcgtgctgccaccgcccgatcccatc
gccccgcgcccgcccttcgactggagccgggcggtcatctacgaactgcatgtccgcggc
ttcaccatgcgccatccggacatcccggtggagcagcgcggcaccttcgcggggctggcc
catccggcggcgatcgcgcatctgcggcggctcggcgtcaccgcggtcgaactgctgccc
tcggccgcctggatcgacgagcggcatctgccggcgctcggcctgacgaattactggggc
tacaacccggcgagcttcctcgcccccgatccgcgcctcgcccctggcggctgggcggag
gtgcgttcggcggtggcggcgctgcagcaggccggcatcgccgtgctgctggacatcgtg
ctgaaccataccggcgagagcgaccggctcggcccgaccgtgtcgctgcgcgggctcgat
cacgccacctattaccggctcgcgaccgacgatcccggccgctgcgtcgacgataccggc
tgcggcaacgccctcgcggtcgatcgcccgccggtgatgcgcctagccatggacgcgctg
cgctgctgggcgctgcgcgcgggggtggacgggttccgcttcgatctggccgccacgctc
ggccgccggcccggcggcttcgatccggccgcgccgctgctcgacgcgatcgcgcaggat
ccgctgctgcgcggtctggtgctgatcgccgagccctgggatctcggccccggtggctac
cggctcggcgccttccccccgacctggggcgagtggaacgaccgattccgcgacggcata
aggcggttctggcgcggcgatgccggcatgctcggcgaactcgccacccgcgtcgccggc
agcgccgatttcttccccccgccacggccggtctcgcgcagcatcaacttcgttaccgcg
catgacggcttcaccctggccgatctggtcgcctacacggtcaagcgcaacacgccgaac
ggcgagggcaaccgcgacggcaccaacaacagcttttcctggaattgcggcatcgagggg
ccgaccgacgatccctcggtgcgtgccgcccgtgtccgcgacgcccgcggcctgctgacc
acgctgctgttcgcgcgcggcacgccgctgatctccatgggcgacgaggccggccgcacc
cagcacggcaacaacaacgcctatgcccaggacaatgccggctcctggttcgactgggag
ggcatggacgagcccctggtggccttcaccgcggcgctgatccaggcccggcaggactgc
ccggcgctgcgggcggcgcaggcgctgaccgggcgttccccggatggcaacggcctgccc
gacgtgatctggcgcaccgcgcgcggccagcagatgacctcggcgcgctggcaggacccg
tccaaccgcaccctggtcgccgtgctctacaccccggccaccccgaccgaggcggccgac
cgcgtgctgctggtgctgcatgccggcaccgaagcggaaaccatcgcgctgccgagccca
cgtgccggcttcgcctggtacctgctgaccgacagcggcagcggcgaggtcggcggcgtc
ggcgcgggcgaggcgatcgatccactgccgatcggcccgcggtcggcggtgctgctgcgc
gagctgccggcgccgcgccggcgcagcatcgacgacaccgaggcgctgcaccggctcggc
cgtgccgccggcatcgcgccggagtggtgggatgtcgaggggcgccgctacgtggtcaac
gaggacaccacgcgggcgctgctgcaggcgatgcgcctgccggcgggcaatcccggcgag
gtcatcgacagcctggggctgctctccgaggacatggggcgcaagttgccgccggcgctg
gtggtgcgggccggcgagccggtgacgctgcgcctgggcccggccgtcccctgggggcgg
ctgcggctgctggtcgagcgcgaggatggcgcccaggttcccctggccgtcgccgcgacc
gagggcgtggccgagccgcttcctaccccggatgggcgcgtgctggtgacgcggcgcgtg
gcgctgccgccgcagccgatcgggcggcacctgatccgcatcgacggcgagcctgatggc
gcgtgctgccggctgacggtggccccgccgcgctgccacctgccgccgctgctgcgcgcc
ggcaaccgcgtgttcggcgttgccgcccagctctattcgctgcgccgcgccggcggcgac
cagggcgtgggcgactacaccgcgctcgcccggcttgcccgagaggcgggacgggaaggg
gcctcggtgatcggcctcaatccgctgcacacgctgttccgtcacgaccggatgcgggcg
agcccgtaccacccctgcgaccgccgcttcctcgacgcgatgccgatcgacgtcgccgtg
ctgccggtgccgccggatgccgtgcgcacccgcaccgccctcgccggcgcggcgcccgcc
ttcgcgaaactgtccgaggtgtcgctggtcgactacccggcggtctgggaagccaagcag
cgcgtgctggaagcggccttcgccgatttccaggcgcgggaaaccgccgcccccactgat
ccgctggtgcaggatttcgcccggttcgtggccgagggcggcaccgagctgcaggatctc
gcccgcttcgaggcgatcaccgagctgcgcggcagctcacactggcaggtctggccggcc
gagttgcgcgatccgcgcaacccgtcggtggccgccgcggcgccgtccgagcgggtgcgg
ttcggctgcttcctgcaatgggtcgccgatcgccagcttgccgccgccgcggctgccgcg
cggaccgccggcatgccgctgggcttctatcgtgacctcgcggtgggggcggcccccgac
ggcgccgaggcatggtcggccggggcgtcgttgatggaccgggtctcggtcggcgctccg
cccgatcccttcgcgccgcagggccaggtctggggcctgccgccacccgacccaagggcg
atgcgggaaagcggatacgccgccttcgcccggctgctgcgcgccaacatgcggcacgcc
ggtgcgctgcgcatcgaccatgtcatggggcttgcccggctgttcatcgtgccggacggt
gcccccggccatgacggcgcctatgtcgcctatccctttgacgacctgctcggcgaagtg
gcgctggagagcgtgcgcaacaactgcctggtggtgggcgaggatctcggcacggtgccg
gaaggcatccgcgagcatctcggcggcgccgacgtgctgtcctaccaggtgctccgcttc
gcccgcgaaggggcggggctgcggccgccagggcgctatccggtgaacgccgccgcctgc
gcggccacccacgacctgccgacgctcgcgggctggtggagcggcaccgacatcctggaa
cgccgcgcgctgggcctgctcagcgctgccggggccgatggcgccgcccgggcgcgggcg
ctggaaaaggccgagctgctggtgttgctgcgggccgaagggctggagatcggcagcggc
gcggtcgacgagccgatgaccgagctgctgatggcgtcgatccatgccctgctggcgcgc
acgccatgccggctggtgctggtgcaggccgacgacctcgtgggcgagctgaccgcggtc
aacctgcccggcaccgaccgggagcggccgaactggcgtcgccgcctgcggcttggggtg
gaaacgctgtgtggcgcagcgccttcggtgttggccgcgctgcggcggcgggaggtggcg
ccggcccggcgagccagcccgccggcggggccggtgggggacagcggccggcacggataa
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