Rhodovastum atsumiense: RHOA_1885
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Entry
RHOA_1885 CDS
T08162
Symbol
sucD
Name
(GenBank) succinyl-CoA synthetase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00020
Citrate cycle (TCA cycle)
rap00640
Propanoate metabolism
rap00660
C5-Branched dibasic acid metabolism
rap00720
Other carbon fixation pathways
rap01100
Metabolic pathways
rap01110
Biosynthesis of secondary metabolites
rap01120
Microbial metabolism in diverse environments
rap01200
Carbon metabolism
Module
rap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RHOA_1885 (sucD)
00640 Propanoate metabolism
RHOA_1885 (sucD)
00660 C5-Branched dibasic acid metabolism
RHOA_1885 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
RHOA_1885 (sucD)
Enzymes [BR:
rap01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
RHOA_1885 (sucD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
CAH2600483
LinkDB
All DBs
Position
RHOA:complement(1951853..1952728)
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AA seq
291 aa
AA seq
DB search
MAILVDANTRVITQGFTGAQGTFHSEQAIAYGTKVVGGVTPGKGGTTHLDLPVFDTVADA
VAATGATATAIYVPPPFAADAILEAIDAELPLIVCITEGIPVLDMVKVKRALEGSKSRLV
GPNCPGVITPDACKIGIMPGHIHRRGKVGIVSRSGTLTYEAVAQTTAAGLGQSTCVGIGG
DPVKGTDFIEVLELFLADPETESIVMIGEIGGQSEIDAAEFIAASKTTKPVVGFIAGATA
PPGRRMGHAGAVISGGKDTAAAKFEALRAAGIHVADSPAALGSTLVKALRG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggccattctcgtcgacgccaacaccagggtcatcacccagggcttcaccggcgcgcag
ggcacgttccattcggaacaggcgatcgcctacggcaccaaggtcgtgggcggggtgacg
ccgggcaagggtggcaccacgcatcttgacctgccggtgttcgacaccgtggccgacgcg
gtggccgcgaccggcgccaccgccaccgccatctacgtgccgccgcccttcgccgccgat
gccatcctcgaagcgatcgacgccgagctgccgctgatcgtgtgcatcaccgaaggcatt
ccggtgctggacatggtcaaggtgaagcgggcgctggaaggctcgaagtcgcggctggtc
gggccgaactgcccgggggtgatcaccccggatgcgtgcaagatcggcatcatgccgggg
catatccatcgccgcggcaaggtgggcatcgtctcccgctccggcacgctgacctatgaa
gcggtggcgcagaccaccgccgccgggctcggccagtccacctgcgtgggcatcggcggc
gatccggtgaagggcaccgacttcatcgaggtgctggagctgttcctcgccgacccggaa
accgagtcgatcgtcatgatcggcgagatcggcggccagagcgagatcgacgcggccgag
ttcatcgcggcaagcaagacgacgaagccggtggtcggtttcatcgccggggccacggcg
ccgccgggccggcgcatgggccatgccggtgcggtgatcagcggcggcaaggacaccgcc
gccgcgaagttcgaggcgctgcgggccgccggcatccacgtcgccgacagcccggctgcc
ctcggctccaccctggtcaaggctctgcgcggctag
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