Rhodovastum atsumiense: RHOA_1912
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Entry
RHOA_1912 CDS
T08162
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rap03032
]
RHOA_1912 (gyrB)
03400 DNA repair and recombination proteins [BR:
rap03400
]
RHOA_1912 (gyrB)
Enzymes [BR:
rap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RHOA_1912 (gyrB)
DNA replication proteins [BR:
rap03032
]
Prokaryotic type
DNA Topoisomerases
RHOA_1912 (gyrB)
DNA repair and recombination proteins [BR:
rap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RHOA_1912 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
GyrB_insert
UFD1
Motif
Other DBs
NCBI-ProteinID:
CAH2600510
LinkDB
All DBs
Position
RHOA:1981996..1984428
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AA seq
810 aa
AA seq
DB search
MSENAAPLPESDAYDASSISVLRGLDAVRKRPGMYIGDTDDGSGLHHMAFEIIDNAVDEA
QAGFASRVELVLNGDGSVTVRDDGRGIPVDIHPEEGISAAEVVLTRLHAGGKFNQNSYKV
SGGLHGVGAAVVNALSEWMDVRIWRDGSEHFIRFVHGDAVAPLAKVGPQDRPNGTEVTFK
PSGQTFTKTEFDITVLERRLRELAFLNSGLAIVLRDERHAPATEISFHYEGGLIAFVEWL
DRAKTPVLSPPISVSAEANGSGIRVEFALSWNDSFHETMLCFTNNIPQRDGGTHLAGFRQ
ALTRVVTKYAEGMGKKDSLSLVGDDMREGMTAVLSVKVPDPKFSSQTKEKLVSSEVQPVV
QAVAADAIAHWFETHPKEAKSIIGKVMDAAAAREAARKARELTRRKGVLDISTLPGKLAD
CQERDPSKCEMFIVEGDSAGGSAKQGRDRKFQAILPLKGKILNVERARFDRMLGSAEIGT
LITALGAGIGRAEADQGGFDVAKLRYHRIVIMTDADVDGSHIRTLLLTFFFRQMPQLIER
GHLFIAQPPLYRAKRGNEERYLKDDAALERFLLDKALAEARLTYADGRELQGPELEEEAS
WLREASLRLRRLAGDVPTALLEQAAIAGALTADTARATAAAQTLVQRLNAISLPSERTWV
VAADGQGLKLTRTVRGVAERHMLEASALRSADARWLAERTQALVTRFAQPAVLRLDRDTQ
PAAGPASAFDRILGHGRRGLTIQRFKGLGEMNPDQLWKTTLDPAARTLLQVKVGDVEDAA
QVFSTLMGDVVEPRREFIVGNALKVANLDV
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaacgccgcgccgcttcccgagtccgacgcctacgatgcctcgtccatctcc
gtgctgcgcggccttgatgccgtgcgcaagcgacccgggatgtatatcggcgacaccgat
gacggctccgggctgcaccacatggccttcgagatcatcgacaatgccgtggacgaggcg
caggccggcttcgcctcccgcgtcgagcttgtgctcaacggcgatggcagcgtgaccgtg
cgcgatgacgggcgcggcattcccgtcgatatccatcccgaggaagggatctcggccgcg
gaggtggtgctgactcgcctgcacgccggcgggaagttcaaccagaactcctacaaggtg
tcgggcggcctgcacggcgtcggcgcggcggtggtgaacgcactgtccgaatggatggac
gtgcgcatctggcgcgacgggtccgagcacttcatccgcttcgtgcacggcgacgcggtg
gcgccgctggccaaggtggggccgcaggaccgcccgaacggcaccgaggtgaccttcaag
ccgagtgggcaaaccttcacaaagacggagttcgacatcacggtgctggagcgccggctg
cgcgaactcgccttcctcaattcgggcctcgccatcgtcctgcgcgacgagcggcacgcc
ccggccaccgaaatctcattccactacgaaggcgggctgatcgccttcgtcgaatggctc
gaccgggccaagacgccggtgctctcgccgccgatcagcgtctcggccgaggccaatggc
agcggcatccgcgtggagttcgcgctgtcctggaacgacagtttccacgagaccatgctg
tgcttcaccaacaacatcccgcagcgtgacggcggcacccacctggccggcttccgccag
gcgctgacccgcgtggtgacgaaatacgccgaggggatgggcaagaaggacagcctgtcc
ctggtcggcgacgacatgcgcgaaggcatgaccgcggtgctgtcggtgaaggtgcccgat
ccgaaattctcctcgcagaccaaggagaaactggtcagctccgaggtgcagccggtggtg
caggccgtggccgcggacgccatcgcgcactggttcgagacgcatccgaaggaagcgaag
tcgatcatcggcaaggtgatggacgccgccgcggcgcgcgaggccgcccgcaaggcgcgc
gagctgacgcgccggaagggcgtgctggatatctccacgctgccgggcaagctcgccgac
tgccaggagcgcgacccctcgaaatgcgagatgttcatcgtcgagggtgattcggccggt
ggctcggccaagcagggacgtgaccgcaagttccaggcgatcctgccgctgaaaggcaag
atcctgaacgtcgagcgcgcgcgcttcgaccgcatgctcggcagcgccgaaatcggcacg
ctgatcactgccctcggcgccggcatcggccgcgccgaggccgaccagggcggcttcgac
gtcgccaagctgcgctaccaccgcatcgtcatcatgaccgacgcggacgtggacggctcg
catatccgcacgctgctgctgaccttcttcttccgccagatgccgcaattgatcgaacgc
ggccatttgttcatcgcgcagccaccgctctaccgggccaagcgcggcaacgaggagcgc
tacctcaaggacgacgcggcgctcgaacgcttcctgctcgacaaggcgctggccgaggcg
cggctgacctatgccgatggccgcgagttgcaggggccggagctggaagaggaagcgtcc
tggctgcgcgaggccagcctgcggctgcgccggctggccggcgacgttccgaccgccctg
ctcgagcaggccgccatcgccggcgccctgaccgcggatacggcgcgggccaccgcggcg
gcacagacgctggtgcaacggctgaacgccatctcgctgccgagcgagcgcacctgggtg
gtggccgccgacgggcagggcctcaagctgacgcgcacggtgcgcggggtggcggagcgg
cacatgctggaggcttcggcattgcgcagcgccgatgcgcgctggctggccgagcgcacg
caggcgctggtcacccgcttcgcccaaccggccgtgctcaggctcgatcgcgacacccag
ccggcggccggccccgccagcgccttcgaccggatcctcgggcatggcaggcgcggcctg
accatccagcgcttcaagggcctgggcgagatgaaccccgaccagttgtggaagaccacg
ctcgatccggcggcccgcacgctgctgcaggtcaaggtcggcgatgtcgaggatgcggcg
caggtgttctccaccctcatgggtgacgttgttgaaccaagacgcgaattcattgtcggc
aatgcgctgaaagtggcgaatctcgacgtctga
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