Rhodovastum atsumiense: RHOA_2110
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Entry
RHOA_2110 CDS
T08162
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00730
Thiamine metabolism
rap01100
Metabolic pathways
rap01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RHOA_2110 (thiC)
Enzymes [BR:
rap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
RHOA_2110 (thiC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CAH2600708
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All DBs
Position
RHOA:2172540..2174375
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AA seq
611 aa
AA seq
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MTVQQKPASVTTGPVIGSRKLYTSPADRPDIRVPFREIDLHPSANEPPVRIYDTSGPFTD
PAAHIDLEAGLTPLRGPWLAGRGFTTIAARAVKPEDNGNIGDDKLVPACPAPREVLGGVA
GRPVTQLEFARAGIITEEMIYAAHRENLGRQEMVAGAEERRADGEDFGAAIPPFITPEFV
RAEIAAGRAIIPANINHPELEPVIIGRNFLVKINANIGNSAVTSSAAEEVEKLVWAIRWG
ADTVMDLSTGRNIHNIRSWIMRNSPVPIGTVPIYQALEKVGGDPDKLDWEVFKDTLIEQA
EQGVDYFTIHAGVRLAYVPLTAKRVTGIVSRGGSIMARWCLAHHRESFLYERFGDICDIM
RKYDVSFSLGDGLRPGSNADANDRAQFAELETLGELTKVAWDKGCQVMIEGPGHVPMHKI
KVNMDKQLRECGEAPFYTLGPLVTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLG
LPDRDDVKVGVVTYRIAAHAADLAKGHPAARLRDDAISRARFEFRWEDQFNLGLDPDTAR
QYHDETMPKEAHKVAHFCSMCGPKFCSMKISQDIRADSERMAGMEEMSASFKAHGSALYL
PEAAEAKGSDD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtccagcagaagcccgcctccgtcaccaccggcccggtgatcggcagccgcaag
ctctacaccagccccgccgaccgacccgacatccgggtgccgttccgcgagatcgacctg
cacccgagcgccaatgagccgccggtgcgcatctacgacacctccggacccttcaccgac
cccgccgcgcatatcgacctcgaggccggcctgacgccgctgcgcgggccctggctcgcc
gggcggggcttcaccaccatcgccgcgcgcgcggtcaagccggaggacaacggcaatatc
ggcgacgacaagctggtccccgcctgccccgccccgcgcgaggtgctcggcggcgtcgcc
gggcggccggtcacgcaactggaattcgcccgcgccggcatcatcaccgaggaaatgatc
tacgccgcccaccgcgagaatctcggccgccaggagatggtggcaggggccgaggaacgg
cgggccgacggcgaggatttcggcgccgcgatcccgcccttcatcacccccgaattcgtc
cgtgccgagatcgcggcgggccgcgccatcatccccgccaacatcaaccacccggagctg
gagccggtcatcatcggccgcaacttcctggtcaagatcaacgccaatatcggcaattcc
gccgtcacctcctcggccgccgaggaagtggagaagctggtctgggcgatccgctggggt
gcggacaccgtcatggatctctcgaccggacggaacatccacaacatccgctcctggatc
atgcgcaacagcccggtgccgatcggcacggtgccgatctaccaggcgctggaaaaggtc
ggcggcgatcccgacaagctcgactgggaagtgttcaaggacacactgatcgagcaggcc
gagcagggcgtcgattacttcaccatccatgccggcgtgcggctcgcctacgtgccgctg
acggcgaagcgcgtgaccggcatcgtcagccgcggcggctcgatcatggcgcgctggtgc
ctcgcccatcaccgcgagagcttcctgtacgagcgcttcggcgacatctgcgacatcatg
cgcaaatacgacgtgagcttctcgctcggggacgggctgcggcccggctccaacgcggac
gccaacgaccgcgcgcagttcgccgagctggagaccctgggcgagctgaccaaggtggcc
tgggacaagggctgccaggtgatgatcgaaggccccggccacgtgccgatgcacaagatc
aaggtcaacatggacaagcagctgcgcgagtgcggcgaggcgccgttctacacgctcggg
ccgctggtgaccgacatcgcgccgggctacgaccacatcacctcggcgatcggggcggcg
atgatcggctggttcggcacggcgatgctctgctacgtgacaccgaaggaacatctgggc
ctgcccgaccgcgacgacgtgaaggtgggcgtggtcacctaccgcatcgccgcgcacgcg
gccgatcttgccaagggccatccggcggcgcggctgcgcgacgacgcgatcagccgggcg
cgcttcgagttccgctgggaggatcagttcaatcttggcctcgatcccgacaccgcacgg
cagtaccacgacgagacgatgccgaaggaagcgcacaaggtcgcgcatttctgcagcatg
tgcgggccgaaattctgctcgatgaagatcagccaggatatccgcgccgattccgagcgg
atggcggggatggaggaaatgagcgcgtccttcaaggcccatgggtcggcgctgtatctg
ccggaggccgcggaggcgaagggcagcgacgactga
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